RNA–Protein interactions for RNA: ENST00000473258.1

COL6A3-210, Transcript of collagen type VI alpha 3 chain, humanhuman

TSL 2

Gene COL6A3, Length 5,433 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A3-210ENST00000473258 ZNF267Q14586 743 aaPredicted RBP9.34□□□□□ -0.92
COL6A3-210ENST00000473258 VEPH1Q14D04 833 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 GPR162Q16538 588 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 FAM47AQ5JRC9 791 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 GRAMD1CQ8IYS0 662 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 PDPRQ8NCN5 879 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 MS4A14Q96JA4 679 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 ART5Q96L15 291 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 PNPLA8Q9NP80 782 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 ERAP1Q9NZ08 941 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 REXO2Q9Y3B8 237 aaKnown RBP9.34□□□□□ -0.92
COL6A3-210ENST00000473258 ZNF451Q9Y4E5 1061 aa9.34□□□□□ -0.92
COL6A3-210ENST00000473258 POLR3AO14802 1390 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 EME2A4GXA9 379 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CLDN25C9JDP6 229 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PTGES3LE9PB15 166 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SSX5O60225 188 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 UNC5CO95185 931 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PRKAR1AP10644 381 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 EIF2AK2P19525 551 aaKnown RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GPD2P43304 727 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 POLA2Q14181 598 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CNPY1Q3B7I2 92 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 LIN54Q6MZP7 749 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DNAJC24Q6P3W2 148 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 AFTPHQ6ULP2 937 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DEFB107AQ8IZN7 70 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 BBS5Q8N3I7 341 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SNX31Q8N9S9 440 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TTC8Q8TAM2 541 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CAVIN3Q969G5 261 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GAL3ST3Q96A11 431 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SETDB2Q96T68 719 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DNAJC7Q99615 494 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 HEMGNQ9BXL5 484 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DCLK3Q9C098 648 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 EHD4Q9H223 541 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PNPLA3Q9NST1 481 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 UHRF1BP1Q6BDS2 1440 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 LRRC53A6NM62 1247 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 H3BNX3 289 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GUCA1CO95843 209 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TRIM23P36406 574 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TGFBR2P37173 567 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PTGDRQ13258 359 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 FAR1Q8WVX9 515 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 WRNIP1Q96S55 665 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 C9orf16Q9BUW7 83 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SEC31BQ9NQW1 1179 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CABP1Q9NZU7 370 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 AGAP1Q9UPQ3 857 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SQORQ9Y6N5 450 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 FAM135BQ49AJ0 1406 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 ILVBLA1L0T0 632 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 FAM196BA6NMK8 535 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 C9IYK1 514 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CRYZL1O95825 349 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 IFNA7P01567 189 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 YES1P07947 543 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 ALDH1A3P47895 512 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GRIK3Q13003 919 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GTF2H3Q13889 308 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SEMA3AQ14563 771 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TBCELQ5QJ74 424 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DEPTORQ8TB45 409 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TATDN2Q93075 761 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 DHRS1Q96LJ7 313 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 RBBP8Q99708 897 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SSX3Q99909 188 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 MYL10Q9BUA6 226 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GCNT4Q9P109 453 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 RAPGEF2Q9Y4G8 1499 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 SOS2Q07890 1332 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 ANKRD50Q9ULJ7 1429 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 KIAA1107Q9UPP5 1409 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 GRM8O00222 908 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TEX33O43247 280 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 ZBED4O75132 1171 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 NTRK1P04629 796 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PCNAP12004 261 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 HOXD12P35452 270 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 MCCD1P59942 119 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 IL18R1Q13478 541 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PPM1LQ5SGD2 360 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 CAMK1DQ8IU85 385 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 KCNB2Q92953 911 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 ERP44Q9BS26 406 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 HERC2P3Q9BVR0 1158 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 COPS7BQ9H9Q2 264 aaPredicted RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TRMT13Q9NUP7 481 aaKnown RBP9.33□□□□□ -0.92
COL6A3-210ENST00000473258 PCSK1NQ9UHG2 260 aa9.33□□□□□ -0.92
COL6A3-210ENST00000473258 TTC21BQ7Z4L5 1316 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 E7EWF7 191 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 COQ9O75208 318 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 ENTPD5O75356 428 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MYO1DO94832 1006 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 HADHAP40939 763 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MAPKAPK2P49137 400 aa9.32□□□□□ -0.92
COL6A3-210ENST00000473258 MAZP56270 477 aaKnown RBP9.32□□□□□ -0.92
COL6A3-210ENST00000473258 AMPD2Q01433 879 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms