RNA–Protein interactions for RNA: ENST00000473257.1

ACTB-209, Transcript of actin beta, humanhuman

TSL 3

Gene ACTB, Length 556 nt, Biotype processed transcript, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-209ENST00000473257 GCNAQ96QF7 691 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 HHIPQ96QV1 700 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 CYP2S1Q96SQ9 504 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 FAM83CQ9BQN1 747 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 TRPC7Q9HCX4 862 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 L1RE1Q9UN81 338 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 AGAP1Q9UPQ3 857 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 SMC3Q9UQE7 1217 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 ZZEF1O43149 2961 aa12.09□□□□□ -0.47
ACTB-209ENST00000473257 MYMKA6NI61 221 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 KPNA7A9QM74 516 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 EIF5BO60841 1220 aaKnown RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 RNF40O75150 1001 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 PAPSS2O95340 614 aaPredicted RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 ITGB3P05106 788 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 ADRB1P08588 477 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 SDHBP21912 280 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 MLLT6P55198 1093 aaPredicted RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 CEBPZQ03701 1054 aaKnown RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 BFSP1Q12934 665 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 RUNX3Q13761 415 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 TCEAL6Q6IPX3 200 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 ZNF720Q7Z2F6 126 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 WDR5BQ86VZ2 330 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 CD302Q8IX05 232 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 THEM5Q8N1Q8 247 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 C1orf127Q8N9H9 656 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 NETO1Q8TDF5 533 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 LARP4BQ92615 738 aaKnown RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 EZH1Q92800 747 aaPredicted RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 KCNN1Q92952 543 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 TCEAL3Q969E4 200 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 PANK2Q9BZ23 570 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 PCIF1Q9H4Z3 704 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 ASB7Q9H672 318 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 OBP2AQ9NY56 170 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 INVSQ9Y283 1065 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 DERAQ9Y315 318 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 C2CD2Q9Y426 696 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 KIF3AQ9Y496 699 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 PCDHB5Q9Y5E4 795 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 WNT6Q9Y6F9 365 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 STYXL1Q9Y6J8 313 aa12.08□□□□□ -0.48
ACTB-209ENST00000473257 ZNF638Q14966 1978 aaKnown RBP12.08□□□□□ -0.48
ACTB-209ENST00000473257 VPS37CA5D8V6 355 aaPredicted RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 SCAMP3O14828 347 aaKnown RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 OBSL1O75147 1896 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 ATP2C2O75185 946 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 FGF19O95750 216 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 IGF2RP11717 2491 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 DDIT3P35638 169 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 LONP1P36776 959 aaKnown RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 AVPR1AP37288 418 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 GALK1P51570 392 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 AASDHQ4L235 1098 aaPredicted RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 TMEM196Q5HYL7 178 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 KCTD17Q8N5Z5 321 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 GLIS3Q8NEA6 775 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 HPS3Q969F9 1004 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 MSANTD3Q96H12 275 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 CBWD1Q9BRT8 395 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 MRPL44Q9H9J2 332 aaKnown RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 TDP1Q9NUW8 608 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 THG1LQ9NWX6 298 aaKnown RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 RALYQ9UKM9 306 aaKnown RBP12.07□□□□□ -0.48
ACTB-209ENST00000473257 GTF3C4Q9UKN8 822 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 DSEQ9UL01 958 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 AKAP13Q12802 2813 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 PTPRJQ12913 1337 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 EML5Q05BV3 1969 aa12.07□□□□□ -0.48
ACTB-209ENST00000473257 DENND4CQ5VZ89 1909 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 A0A087X0B3 334 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 C2orf78A6NCI8 922 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 RPP40O75818 363 aaKnown RBP12.06□□□□□ -0.48
ACTB-209ENST00000473257 PPP1R37O75864 691 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 CCDC192P0DO97 292 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 PLCB2Q00722 1185 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 GRSF1Q12849 480 aaKnown RBP eCLIP12.06□□□□□ -0.486e-7■□□□□ 10
ACTB-209ENST00000473257 PTPAQ15257 358 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 SV2CQ496J9 727 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 MON1AQ86VX9 555 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 SFTPA1Q8IWL2 248 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 SCN4BQ8IWT1 228 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 DCP1BQ8IZD4 617 aaKnown RBP12.06□□□□□ -0.48
ACTB-209ENST00000473257 KRI1Q8N9T8 703 aaKnown RBP12.06□□□□□ -0.48
ACTB-209ENST00000473257 CXorf38Q8TB03 319 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 SPPL2BQ8TCT7 592 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 GAB3Q8WWW8 586 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 DNAJC19Q96DA6 116 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 TSPAN18Q96SJ8 248 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 PKMYT1Q99640 499 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 STRA6Q9BX79 667 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 LINC00597Q9H2U6 94 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 PDE11AQ9HCR9 933 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 DDX43Q9NXZ2 648 aaKnown RBP12.06□□□□□ -0.48
ACTB-209ENST00000473257 HSFX1Q9UBD0 423 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 SIX4Q9UIU6 781 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 FBXO2Q9UK22 296 aaPredicted RBP12.06□□□□□ -0.48
ACTB-209ENST00000473257 SLC8A2Q9UPR5 921 aa12.06□□□□□ -0.48
ACTB-209ENST00000473257 TRDMT1O14717 391 aaKnown RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms