RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 KCNT1Q5JUK3 1230 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 CENPUQ71F23 418 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 TFAP2BQ92481 460 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 RNPEPL1Q9HAU8 725 aa22.22■■□□□ 1.15
COL18A1-207ENST00000473212 PEX11AO75192 247 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 KRT4P19013 534 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 MYL6P60660 151 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 CNTN2Q02246 1040 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 XKR3Q5GH77 459 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 WDTC1Q8N5D0 677 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 ZNF75CPQ92670 426 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 INPP5DQ92835 1189 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 CGRRF1Q99675 332 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 PSMC3IPQ9P2W1 217 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 RLFQ13129 1914 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 A0A0B4J269 797 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 SGK1O00141 431 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 GNAZP19086 355 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 HIRAP54198 1017 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 VCPP55072 806 aaKnown RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 BACE1P56817 501 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 ORC1Q13415 861 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 OASLQ15646 514 aaKnown RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 TAF1BQ53T94 588 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 ANKRD22Q5VYY1 191 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 ZNF772Q68DY9 489 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 FAM167BQ9BTA0 163 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 PORCNQ9H237 461 aa22.21■■□□□ 1.15
COL18A1-207ENST00000473212 ZMYND8Q9ULU4 1186 aaPredicted RBP22.21■■□□□ 1.15
COL18A1-207ENST00000473212 WDR91A4D1P6 747 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 GPX6P59796 221 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 MSS51Q4VC12 460 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 CDR2LQ86X02 465 aaPredicted RBP22.2■■□□□ 1.14
COL18A1-207ENST00000473212 NPHS2Q9NP85 383 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 DRG1Q9Y295 367 aaKnown RBP22.2■■□□□ 1.14
COL18A1-207ENST00000473212 ATP2A1O14983 1001 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 CALB2P22676 271 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 DCUN1D2Q6PH85 259 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 CCDC125Q86Z20 511 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 MICAL1Q8TDZ2 1067 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 SPDL1Q96EA4 605 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 DHX33Q9H6R0 707 aaKnown RBP22.2■■□□□ 1.14
COL18A1-207ENST00000473212 SLC24A2Q9UI40 661 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 ADGRA2Q96PE1 1338 aa22.2■■□□□ 1.14
COL18A1-207ENST00000473212 hCG_1818297A0A087WSY0 165 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 TCRBV5S1A1TA0A578 114 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 EIF4E1BA6NMX2 242 aaKnown RBP22.19■■□□□ 1.14
COL18A1-207ENST00000473212 CAPSQ13938 189 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 MAPK6Q16659 721 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 SYCP2LQ5T4T6 812 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 CIAPIN1Q6FI81 312 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 GPAT2Q6NUI2 795 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 ZWILCHQ9H900 591 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 ZNF302Q9NR11 478 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 SPATA31C2B4DYI2 1134 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 OATP04181 439 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 SSTR1P30872 391 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 ABL2P42684 1182 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 ZNF132P52740 706 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 RAD23BP54727 409 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 TGFB2P61812 414 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 MCL1Q07820 350 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 TFDP3Q5H9I0 405 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 DNAJC24Q6P3W2 148 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 NLRP9Q7RTR0 991 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 NAF1Q96HR8 494 aaKnown RBP22.19■■□□□ 1.14
COL18A1-207ENST00000473212 NUDCD1Q96RS6 583 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 KLF6Q99612 283 aaPredicted RBP22.19■■□□□ 1.14
COL18A1-207ENST00000473212 CYLDQ9NQC7 956 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 SHOC2Q9UQ13 582 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 CNTN6Q9UQ52 1028 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 CLUHO75153 1309 aa22.19■■□□□ 1.14
COL18A1-207ENST00000473212 ADRA1DP25100 572 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 ARL2P36404 184 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 GEMIN4P57678 1058 aaKnown RBP22.18■■□□□ 1.14
COL18A1-207ENST00000473212 TFDP1Q14186 410 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 HIF1AQ16665 826 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 KIAA0319LQ8IZA0 1049 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 STK32AQ8WU08 396 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 WDR83Q9BRX9 315 aaKnown RBP22.18■■□□□ 1.14
COL18A1-207ENST00000473212 SLC24A3Q9HC58 644 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 RABGEF1Q9UJ41 708 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 HACL1Q9UJ83 578 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 ZFP69BQ9UJL9 534 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 SMNDC1O75940 238 aaKnown RBP eCLIP22.18■■□□□ 1.146e-6■□□□□ 8.8
COL18A1-207ENST00000473212 CD48P09326 243 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 TPBGLP0DKB5 382 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 OSTNP61366 133 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 PLEKHG4Q58EX7 1191 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 EFHC2Q5JST6 749 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 TRIM68Q6AZZ1 485 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 MTDHQ86UE4 582 aaKnown RBP22.18■■□□□ 1.14
COL18A1-207ENST00000473212 ARFGAP1Q8N6T3 406 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 UBR7Q8N806 425 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 WRNIP1Q96S55 665 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 PCDH9Q9HC56 1237 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 NUMBLQ9Y6R0 609 aa22.18■■□□□ 1.14
COL18A1-207ENST00000473212 TCRBV7S3A2A0A539 114 aa22.17■■□□□ 1.14
COL18A1-207ENST00000473212 H0Y3Z8 333 aa22.17■■□□□ 1.14
COL18A1-207ENST00000473212 GOLGA8RI6L899 631 aa22.17■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms