RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 TBXAS1P24557 533 aaPredicted RBP22.18■■□□□ 1.14
TOP3A-204ENST00000472959 TUFMP49411 452 aaKnown RBP22.18■■□□□ 1.14
TOP3A-204ENST00000472959 KCNQ1P51787 676 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 PLD1Q13393 1074 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 SMAD2Q15796 467 aaKnown RBP22.18■■□□□ 1.14
TOP3A-204ENST00000472959 AOPEPQ8N6M6 819 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 ANKRD20A12PQ8NF67 263 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 MYCBPAPQ8TBZ2 947 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 SMG7Q92540 1137 aaKnown RBP22.18■■□□□ 1.14
TOP3A-204ENST00000472959 ZNF707Q96C28 371 aaPredicted RBP22.18■■□□□ 1.14
TOP3A-204ENST00000472959 NDST4Q9H3R1 872 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 NME7Q9Y5B8 376 aa22.18■■□□□ 1.14
TOP3A-204ENST00000472959 MYBPHLA2RUH7 354 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 ATP2C2O75185 946 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 LRG1P02750 347 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 TPM2P07951 284 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 PTPN1P18031 435 aaKnown RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 PSMC1P62191 440 aaKnown RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 CUL2Q13617 745 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 CBX2Q14781 532 aaPredicted RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 GBP6Q6ZN66 633 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 C4orf50Q6ZRC1 276 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 SPATA2LQ8IUW3 424 aaPredicted RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 B3GALNT2Q8NCR0 500 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 FUBP3Q96I24 572 aaKnown RBP eCLIP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 INTS2Q9H0H0 1204 aaKnown RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 PIDD1Q9HB75 910 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 CRTAC1Q9NQ79 661 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 TMLHEQ9NVH6 421 aa22.17■■□□□ 1.14
TOP3A-204ENST00000472959 ABI2Q9NYB9 513 aaPredicted RBP22.17■■□□□ 1.14
TOP3A-204ENST00000472959 PLXNA3P51805 1871 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 BMP1P13497 986 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 ZNF18P17022 549 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 ALDH1A3P47895 512 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 NDST1P52848 882 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 YWHAEP62258 255 aaKnown RBP22.16■■□□□ 1.14
TOP3A-204ENST00000472959 LRMPQ12912 555 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 CFAP221Q4G0U5 840 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 MIIPQ5JXC2 388 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 DHX40Q8IX18 779 aaKnown RBP22.16■■□□□ 1.14
TOP3A-204ENST00000472959 CRYBG2Q8N1P7 616 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 CRISPLD1Q9H336 500 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 GCNT4Q9P109 453 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 SLC27A5Q9Y2P5 690 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 YIPF1Q9Y548 306 aa22.16■■□□□ 1.14
TOP3A-204ENST00000472959 BECN2A8MW95 431 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 CCL16O15467 120 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 CILPO75339 1184 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 HAPLN1P10915 354 aaPredicted RBP22.15■■□□□ 1.14
TOP3A-204ENST00000472959 CDK11BP21127 795 aaKnown RBP22.15■■□□□ 1.14
TOP3A-204ENST00000472959 KRT31Q15323 416 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 EXOC3L4Q17RC7 722 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 TJAP1Q5JTD0 557 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 ELMOD1Q8N336 334 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 NT5C1AQ9BXI3 368 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 DPEP3Q9H4B8 488 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 CISHQ9NSE2 258 aa22.15■■□□□ 1.14
TOP3A-204ENST00000472959 LRRC10BA6NIK2 292 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 CD58P19256 250 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 MAGEA11P43364 429 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 EPHB3P54753 998 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 GCNT1Q02742 428 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 TWF1Q12792 350 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 MGAT5BQ3V5L5 792 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 MDH1BQ5I0G3 518 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 ACOT1Q86TX2 421 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 PPM1KQ8N3J5 372 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 MYLPFQ96A32 169 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 PCED1BQ96HM7 432 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 FAM81BQ96LP2 452 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 SEPT5Q99719 369 aaPredicted RBP22.14■■□□□ 1.13
TOP3A-204ENST00000472959 ARID3AQ99856 593 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 CRACR2AQ9BSW2 395 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 HSD3B7Q9H2F3 369 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 TAB2Q9NYJ8 693 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 PRKAG3Q9UGI9 489 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 LIMA1Q9UHB6 759 aaKnown RBP22.14■■□□□ 1.13
TOP3A-204ENST00000472959 ASB3Q9Y575 518 aa22.14■■□□□ 1.13
TOP3A-204ENST00000472959 PES1O00541 588 aaKnown RBP22.13■■□□□ 1.13
TOP3A-204ENST00000472959 IL9P15248 144 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 RPL10AP62906 217 aaKnown RBP22.13■■□□□ 1.13
TOP3A-204ENST00000472959 CYP27A1Q02318 531 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 IQCB1Q15051 598 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 IQCEQ6IPM2 695 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 TRIM65Q6PJ69 517 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 VSTM1Q6UX27 236 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 TTC9BQ8N6N2 239 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 WHAMMQ8TF30 809 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 JAKMIP2Q96AA8 810 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 ZNF512Q96ME7 567 aaPredicted RBP22.13■■□□□ 1.13
TOP3A-204ENST00000472959 WDR6Q9NNW5 1121 aaKnown RBP22.13■■□□□ 1.13
TOP3A-204ENST00000472959 HMGXB4Q9UGU5 601 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 CDH22Q9UJ99 828 aa22.13■■□□□ 1.13
TOP3A-204ENST00000472959 PTPN2P17706 415 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 CYP2F1P24903 491 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 PON1P27169 355 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 CCDC142Q17RM4 750 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 PHLDB3Q6NSJ2 640 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 ENOSF1Q7L5Y1 443 aa22.12■■□□□ 1.13
TOP3A-204ENST00000472959 ITIH5Q86UX2 942 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms