RNA–Protein interactions for RNA: ENST00000472725.5

SF1-213, Transcript of splicing factor 1, humanhuman

TSL 3

Gene SF1, Length 632 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-213ENST00000472725 ELMO3Q96BJ8 720 aa21.3■■□□□ 1
SF1-213ENST00000472725 TMEM209Q96SK2 561 aa21.3■■□□□ 1
SF1-213ENST00000472725 PLCB1Q9NQ66 1216 aa21.3■■□□□ 1
SF1-213ENST00000472725 UTP3Q9NQZ2 479 aaKnown RBP eCLIP21.3■■□□□ 1
SF1-213ENST00000472725 SPDYE4A6NLX3 237 aa21.29■■□□□ 1
SF1-213ENST00000472725 PRRG1O14668 218 aa21.29■■□□□ 1
SF1-213ENST00000472725 C8AP07357 584 aa21.29■■□□□ 1
SF1-213ENST00000472725 SLC9A1P19634 815 aa21.29■■□□□ 1
SF1-213ENST00000472725 MFAP3P55082 362 aa21.29■■□□□ 1
SF1-213ENST00000472725 LRMPQ12912 555 aa21.29■■□□□ 1
SF1-213ENST00000472725 PPM1LQ5SGD2 360 aa21.29■■□□□ 1
SF1-213ENST00000472725 PHLDB3Q6NSJ2 640 aa21.29■■□□□ 1
SF1-213ENST00000472725 EP400NLQ6ZTU2 488 aa21.29■■□□□ 1
SF1-213ENST00000472725 UBR7Q8N806 425 aa21.29■■□□□ 1
SF1-213ENST00000472725 CEP295NLQ96MC4 621 aa21.29■■□□□ 1
SF1-213ENST00000472725 ERGIC2Q96RQ1 377 aa21.29■■□□□ 1
SF1-213ENST00000472725 CYP4F11Q9HBI6 524 aa21.29■■□□□ 1
SF1-213ENST00000472725 CD207Q9UJ71 328 aa21.29■■□□□ 1
SF1-213ENST00000472725 GTF3C4Q9UKN8 822 aa21.29■■□□□ 1
SF1-213ENST00000472725 KIAA1257Q9ULG3 409 aa21.29■■□□□ 1
SF1-213ENST00000472725 NME7Q9Y5B8 376 aa21.29■■□□□ 1
SF1-213ENST00000472725 MYBPHLA2RUH7 354 aa21.28■■□□□ 1
SF1-213ENST00000472725 SPATA31D3P0C874 917 aa21.28■■□□□ 1
SF1-213ENST00000472725 MAGEA11P43364 429 aa21.28■■□□□ 1
SF1-213ENST00000472725 RBM10P98175 930 aaKnown RBP21.28■■□□□ 1
SF1-213ENST00000472725 DLX2Q07687 328 aaPredicted RBP21.28■■□□□ 1
SF1-213ENST00000472725 KCNMA1Q12791 1236 aa21.28■■□□□ 1
SF1-213ENST00000472725 LEXMQ3ZCV2 418 aa21.28■■□□□ 1
SF1-213ENST00000472725 CES5AQ6NT32 575 aa21.28■■□□□ 1
SF1-213ENST00000472725 SYCE2Q6PIF2 218 aa21.28■■□□□ 1
SF1-213ENST00000472725 SPATA31D4Q6ZUB0 917 aa21.28■■□□□ 1
SF1-213ENST00000472725 SPATA2LQ8IUW3 424 aaPredicted RBP21.28■■□□□ 1
SF1-213ENST00000472725 SLC7A14Q8TBB6 771 aa21.28■■□□□ 1
SF1-213ENST00000472725 ARID3AQ99856 593 aa21.28■■□□□ 1
SF1-213ENST00000472725 ADAM7Q9H2U9 754 aa21.28■■□□□ 1
SF1-213ENST00000472725 UBE2TQ9NPD8 197 aaPredicted RBP21.28■■□□□ 1
SF1-213ENST00000472725 CRTAC1Q9NQ79 661 aa21.28■■□□□ 1
SF1-213ENST00000472725 RTN4Q9NQC3 1192 aaKnown RBP21.28■■□□□ 1
SF1-213ENST00000472725 THEGQ9P2T0 379 aa21.28■■□□□ 1
SF1-213ENST00000472725 CNTN6Q9UQ52 1028 aa21.28■■□□□ 1
SF1-213ENST00000472725 ATP8B3O60423 1300 aa21.28■■□□□ 1
SF1-213ENST00000472725 A0A1B0GTH6 734 aa21.27■■□□□ 1
SF1-213ENST00000472725 XYLBO75191 536 aa21.27■■□□□ 1
SF1-213ENST00000472725 VNN2O95498 520 aa21.27■■□□□ 1
SF1-213ENST00000472725 SERPINC1P01008 464 aa21.27■■□□□ 1
SF1-213ENST00000472725 CD58P19256 250 aa21.27■■□□□ 1
SF1-213ENST00000472725 KCNA5P22460 613 aa21.27■■□□□ 1
SF1-213ENST00000472725 PSMC1P62191 440 aaKnown RBP21.27■■□□□ 1
SF1-213ENST00000472725 UBXN1Q04323 297 aa21.27■■□□□ 1
SF1-213ENST00000472725 DUSP4Q13115 394 aa21.27■■□□□ 1
SF1-213ENST00000472725 VSTM1Q6UX27 236 aa21.27■■□□□ 1
SF1-213ENST00000472725 ARHGEF19Q8IW93 802 aa21.27■■□□□ 1
SF1-213ENST00000472725 ATAD1Q8NBU5 361 aa21.27■■□□□ 1
SF1-213ENST00000472725 SMRP1Q8NCR6 262 aa21.27■■□□□ 1
SF1-213ENST00000472725 WHAMMQ8TF30 809 aa21.27■■□□□ 1
SF1-213ENST00000472725 TMEM176AQ96HP8 235 aa21.27■■□□□ 1
SF1-213ENST00000472725 PGLYRP2Q96PD5 576 aa21.27■■□□□ 1
SF1-213ENST00000472725 PRKD2Q9BZL6 878 aa21.27■■□□□ 1
SF1-213ENST00000472725 S1PR5Q9H228 398 aa21.27■■□□□ 1
SF1-213ENST00000472725 SIX2Q9NPC8 291 aa21.27■■□□□ 1
SF1-213ENST00000472725 TMLHEQ9NVH6 421 aa21.27■■□□□ 1
SF1-213ENST00000472725 FAM50BQ9Y247 325 aa21.27■■□□□ 1
SF1-213ENST00000472725 INSL5Q9Y5Q6 135 aa21.27■■□□□ 1
SF1-213ENST00000472725 PTPRDP23468 1912 aa21.27■■□□□ 1
SF1-213ENST00000472725 HCRTO43612 131 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 ATP2C2O75185 946 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 SEC24AO95486 1093 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 LRG1P02750 347 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 PAEPP09466 180 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 HAPLN1P10915 354 aaPredicted RBP21.26■□□□□ 0.99
SF1-213ENST00000472725 ACO1P21399 889 aaKnown RBP21.26■□□□□ 0.99
SF1-213ENST00000472725 ALDH1A3P47895 512 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 RPL10AP62906 217 aaKnown RBP21.26■□□□□ 0.99
SF1-213ENST00000472725 SMAD4Q13485 552 aaKnown RBP21.26■□□□□ 0.99
SF1-213ENST00000472725 MDH1BQ5I0G3 518 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 KLHDC7AQ5VTJ3 777 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 RRAGAQ7L523 313 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 GPR149Q86SP6 731 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 ACOT1Q86TX2 421 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 PCED1BQ96HM7 432 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 NECTIN4Q96NY8 510 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 ELOVL4Q9GZR5 314 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 DPEP3Q9H4B8 488 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 ABI2Q9NYB9 513 aaPredicted RBP21.26■□□□□ 0.99
SF1-213ENST00000472725 ASB3Q9Y575 518 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 BRWD1Q9NSI6 2320 aa21.26■□□□□ 0.99
SF1-213ENST00000472725 CCDC195A0A1B0GUA6 201 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 A0A1W2PQC6 194 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 MTHFRP42898 656 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 RAD23BP54727 409 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 FANCCQ00597 558 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 DPY19L2P1Q6NXN4 242 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 ELMOD1Q8N336 334 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 ATXN2LQ8WWM7 1075 aaKnown RBP21.25■□□□□ 0.99
SF1-213ENST00000472725 MYLPFQ96A32 169 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 RIPOR3Q96MK2 946 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 KREMEN1Q96MU8 473 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 HMGXB4Q9UGU5 601 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 SIK3Q9Y2K2 1263 aa21.25■□□□□ 0.99
SF1-213ENST00000472725 YIPF1Q9Y548 306 aa21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms