RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 DDX49Q9Y6V7 483 aaKnown RBP3.98□□□□□ -1.77
XRN1-209ENST00000472625 MCM3APO60318 1980 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 DMDP11532 3685 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 LAMA4Q16363 1823 aa3.98□□□□□ -1.77
XRN1-209ENST00000472625 KDM3AQ9Y4C1 1321 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 PRRC2BQ5JSZ5 2229 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 DENND3A2RUS2 1198 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 MBLAC1A4D2B0 266 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 CCDC69A6NI79 296 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 DLX3O60479 287 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 EYA4O95677 639 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 FOSP01100 380 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 MPOP05164 745 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 GHRP10912 638 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 SCG2P13521 617 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 HOXB8P17481 243 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 ATF7P17544 494 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 LAG3P18627 525 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 TCF7P36402 384 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 LIMS1P48059 325 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 MRE11P49959 708 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 PPP2R2AP63151 447 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 MRPS6P82932 125 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 ZNF200P98182 395 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 SETQ01105 290 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 NHLH1Q02575 133 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NUCB1Q02818 461 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 TROAPQ12815 778 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 COASYQ13057 564 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 LAPTM5Q13571 262 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 GPNMBQ14956 572 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 SEC23AQ15436 765 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NTRK3Q16288 839 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 FBXO47Q5MNV8 452 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 YOD1Q5VVQ6 348 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 FAM160B1Q5W0V3 765 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 KRT40Q6A162 431 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 SYNE3Q6ZMZ3 975 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.97□□□□□ -1.77
XRN1-209ENST00000472625 SPATC1Q76KD6 591 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 PLPPR4Q7Z2D5 763 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 UBALD2Q8IYN6 164 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 ZDHHC14Q8IZN3 488 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 EFHBQ8N7U6 833 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 TMEM145Q8NBT3 493 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 SMRP1Q8NCR6 262 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 CCDC12Q8WUD4 166 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 SEPT1Q8WYJ6 367 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 EDAQ92838 391 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 DACT3Q96B18 629 aaPredicted RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 NECTIN4Q96NY8 510 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NEK1Q96PY6 1258 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 PIGSQ96S52 555 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 MRPL9Q9BYD2 267 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 PSTPIP2Q9H939 334 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 RXFP1Q9HBX9 757 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NGRNQ9NPE2 291 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 INCENPQ9NQS7 918 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 SETD4Q9NVD3 440 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 RBM28Q9NW13 759 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 GULP1Q9UBP9 304 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 PUF60Q9UHX1 559 aaKnown RBP3.97□□□□□ -1.77
XRN1-209ENST00000472625 LZTS1Q9Y250 596 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NR2E1Q9Y466 385 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 TRPV2Q9Y5S1 764 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 COL1A2P08123 1366 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 C5orf42Q9H799 3197 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 LCTP09848 1927 aa3.97□□□□□ -1.77
XRN1-209ENST00000472625 NFASCO94856 1347 aa3.96□□□□□ -1.77
XRN1-209ENST00000472625 IGSF9BQ9UPX0 1349 aa3.96□□□□□ -1.77
XRN1-209ENST00000472625 MUC6Q6W4X9 2439 aa3.96□□□□□ -1.77
XRN1-209ENST00000472625 SIP14410 1827 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 SMIM35A0A1B0GVV1 85 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 LOC101059915A0A1B0GWI6 518 aaPredicted RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 OTOL1A6NHN0 477 aaPredicted RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 MBTPS2O43462 519 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 DGKIO75912 1065 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 PAMP19021 973 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 TMOD1P28289 359 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 HOXC12P31275 282 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 MCM5P33992 734 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 ARL4AP40617 200 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 LIFRP42702 1097 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 MAPKAPK2P49137 400 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 SARSP49591 514 aaKnown RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 RCAN1P53805 252 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 ADAM17P78536 824 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 CDC42EP1Q00587 391 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 KRT17Q04695 432 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 DLX2Q07687 328 aaPredicted RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 SIGLEC14Q08ET2 396 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 GIT2Q14161 759 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 LPIN1Q14693 890 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 SPOUT1Q5T280 376 aaKnown RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 UTP14CQ5TAP6 766 aaKnown RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 CES5AQ6NT32 575 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 TMCO2Q7Z6W1 182 aaPredicted RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 FAM129CQ86XR2 697 aa3.96□□□□□ -1.78
XRN1-209ENST00000472625 SMAP1Q8IYB5 467 aaPredicted RBP3.96□□□□□ -1.78
XRN1-209ENST00000472625 THNSL1Q8IYQ7 743 aa3.96□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms