RNA–Protein interactions for RNA: ENST00000472066.1

PRKCB-205, Transcript of protein kinase C beta, humanhuman

TSL 3

Gene PRKCB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-205ENST00000472066 CCDC149Q6ZUS6 474 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 RTL10Q7L3V2 364 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 CRYBG2Q8N1P7 616 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 UBR7Q8N806 425 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 C12orf76Q8N812 135 aaPredicted RBP13.14□□□□□ -0.31
PRKCB-205ENST00000472066 B3GALNT2Q8NCR0 500 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 SLC7A14Q8TBB6 771 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 MYCBPAPQ8TBZ2 947 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 C2orf15Q8WU43 125 aaKnown RBP13.14□□□□□ -0.31
PRKCB-205ENST00000472066 KAT5Q92993 513 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 TNIP3Q96KP6 325 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 TWNKQ96RR1 684 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 NT5C1AQ9BXI3 368 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 ELOVL4Q9GZR5 314 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 S1PR5Q9H228 398 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 CRISPLD1Q9H336 500 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 SIX2Q9NPC8 291 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 RTN4Q9NQC3 1192 aaKnown RBP13.14□□□□□ -0.31
PRKCB-205ENST00000472066 ZDHHC7Q9NXF8 308 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 APEX2Q9UBZ4 518 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 SLC27A5Q9Y2P5 690 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 PCDHB5Q9Y5E4 795 aa13.14□□□□□ -0.31
PRKCB-205ENST00000472066 VWA8A3KMH1 1905 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 COL6A3P12111 3177 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 CCDC195A0A1B0GUA6 201 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 SPDYE4A6NLX3 237 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 H3BQ06 376 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 RFPL2O75678 378 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 SERPINC1P01008 464 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 ACO1P21399 889 aaKnown RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 MFAP3P55082 362 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 YWHAEP62258 255 aaKnown RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 UBXN1Q04323 297 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 MAPRE1Q15691 268 aaKnown RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 FILIP1LQ4L180 1135 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 ZNF394Q53GI3 561 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 MDH1BQ5I0G3 518 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 PPM1LQ5SGD2 360 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 RARS2Q5T160 578 aaKnown RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 TMC5Q6UXY8 1006 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 ACOT1Q86TX2 421 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 SPATA2LQ8IUW3 424 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 RNF214Q8ND24 703 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 CMASQ8NFW8 434 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 SPPL2BQ8TCT7 592 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 JAKMIP2Q96AA8 810 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 FAM81BQ96LP2 452 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 KREMEN1Q96MU8 473 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 NAP1L5Q96NT1 182 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 APOL5Q9BWW9 433 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 SFXN1Q9H9B4 322 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 ABI2Q9NYB9 513 aaPredicted RBP13.13□□□□□ -0.31
PRKCB-205ENST00000472066 HSFX1Q9UBD0 423 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 CD207Q9UJ71 328 aa13.13□□□□□ -0.31
PRKCB-205ENST00000472066 PRRC2BQ5JSZ5 2229 aaKnown RBP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ATG2AQ2TAZ0 1938 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 A0A1B0GTH6 734 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 TEX33O43247 280 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 PAPLNO95428 1278 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 HNRNPA1P09651 372 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 HAPLN1P10915 354 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 HOXA9P31269 272 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 TUFMP49411 452 aaKnown RBP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 RAD23BP54727 409 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 FANCCQ00597 558 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 CYP27A1Q02318 531 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ITIH3Q06033 890 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 CLUL1Q15846 466 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 LEXMQ3ZCV2 418 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 CFAP221Q4G0U5 840 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 KLHDC7AQ5VTJ3 777 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 C4orf50Q6ZRC1 276 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ENOSF1Q7L5Y1 443 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 TTC9BQ8N6N2 239 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 SLC4A11Q8NBS3 891 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 MYLPFQ96A32 169 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ZNF707Q96C28 371 aaPredicted RBP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 PCED1BQ96HM7 432 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 TMEM176AQ96HP8 235 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 FUBP3Q96I24 572 aaKnown RBP eCLIP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ANP32EQ9BTT0 268 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 LSM14BQ9BX40 385 aaKnown RBP13.12□□□□□ -0.31
PRKCB-205ENST00000472066 B3GNT5Q9BYG0 378 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 PRKD2Q9BZL6 878 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 DNAI2Q9GZS0 605 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ADAM7Q9H2U9 754 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 ABCB6Q9NP58 842 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 DNAJC12Q9UKB3 198 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 SIK3Q9Y2K2 1263 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 INSL5Q9Y5Q6 135 aa13.12□□□□□ -0.31
PRKCB-205ENST00000472066 RNF225M0QZC1 329 aaPredicted RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 CCL16O15467 120 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 SOAT2O75908 522 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 TRIM21P19474 475 aaKnown RBP13.11□□□□□ -0.31
PRKCB-205ENST00000472066 CYP2F1P24903 491 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 ALDH1A3P47895 512 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 KLK7P49862 253 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 TFF2Q03403 129 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 TWF1Q12792 350 aa13.11□□□□□ -0.31
PRKCB-205ENST00000472066 NR1I3Q14994 352 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms