RNA–Protein interactions for RNA: ENST00000472027.1

SYN3-211, Transcript of synapsin III, humanhuman

TSL 4

Gene SYN3, Length 595 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYN3-211ENST00000472027 MKNK1Q9BUB5 465 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 SNX25Q9H3E2 840 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 GDE1Q9NZC3 331 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 CDH9Q9ULB4 789 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 DUSP12Q9UNI6 340 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 NME7Q9Y5B8 376 aa9.8□□□□□ -0.84
SYN3-211ENST00000472027 A0A1W2PRU2 124 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 TRIM49BA6NDI0 452 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 BIN1O00499 593 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CLSTN1O94985 981 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 TRIM49P0CI25 452 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 TRIM49CP0CI26 452 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 EPB41P11171 864 aaKnown RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 CD44P16070 742 aaKnown RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 COL9A1P20849 921 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 BMP6P22004 513 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CCNE1P24864 410 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CYP2F1P24903 491 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 PPP1R2P41236 205 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 GCLMP48507 274 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 GPR15P49685 360 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CDH8P55286 799 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 MCCD1P59942 119 aaPredicted RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 PSMC1P62191 440 aaKnown RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 LRRC63Q05C16 580 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 STIM1Q13586 685 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 MORC3Q14149 939 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 VEPH1Q14D04 833 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 TEAD2Q15562 447 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CAMK4Q16566 473 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CCDC142Q17RM4 750 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 ZNF667Q5HYK9 610 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 MTSS1LQ765P7 747 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 ITIH5Q86UX2 942 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 SPATA2LQ8IUW3 424 aaPredicted RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 ZC3H3Q8IXZ2 948 aaKnown RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 GPR152Q8TDT2 470 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 ZSWIM3Q96MP5 696 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 SYT15Q9BQS2 421 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 MMRN2Q9H8L6 949 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 ZNF334Q9HCZ1 680 aaPredicted RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 ABCB6Q9NP58 842 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 CRTAC1Q9NQ79 661 aa9.79□□□□□ -0.84
SYN3-211ENST00000472027 MAGEC2Q9UBF1 373 aaPredicted RBP9.79□□□□□ -0.84
SYN3-211ENST00000472027 TSC2P49815 1807 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 A8MXQ7 604 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PPP1R3GB7ZBB8 358 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PSMA7O14818 248 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 HLA-DRAP01903 254 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 CFHP08603 1231 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 P4HA1P13674 534 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PTPN1P18031 435 aaKnown RBP9.78□□□□□ -0.84
SYN3-211ENST00000472027 GABRR2P28476 465 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 GTF2H1P32780 548 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PIK3CAP42336 1068 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 RAP1GAPP47736 663 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 CYP27A1Q02318 531 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 MAPRE1Q15691 268 aaKnown RBP9.78□□□□□ -0.84
SYN3-211ENST00000472027 TAF12Q16514 161 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 DDR2Q16832 855 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 CFAP221Q4G0U5 840 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 SDHAF4Q5VUM1 108 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 KRT39Q6A163 491 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 TANGO2Q6ICL3 276 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 SPOPLQ6IQ16 392 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 KLHL10Q6JEL2 608 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 C4orf50Q6ZRC1 276 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 CLEC17AQ6ZS10 378 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 GAREM2Q75VX8 874 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 SHKBP1Q8TBC3 707 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 TAS1R2Q8TE23 839 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 TAF4BQ92750 862 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 MYLPFQ96A32 169 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PCED1BQ96HM7 432 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 FUBP3Q96I24 572 aaKnown RBP eCLIP9.78□□□□□ -0.84
SYN3-211ENST00000472027 KXD1Q9BQD3 176 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 PLA2G2FQ9BZM2 168 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 GPR88Q9GZN0 384 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 SDCBP2Q9H190 292 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 ATXN3LQ9H3M9 355 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 DPEP3Q9H4B8 488 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 SMYD3Q9H7B4 428 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 TMEM8AQ9HCN3 771 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.78□□□□□ -0.84
SYN3-211ENST00000472027 KIAA1468Q9P260 1216 aa9.78□□□□□ -0.84
SYN3-211ENST00000472027 NOTCH4Q99466 2003 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 SLC16A3O15427 465 aaKnown RBP9.77□□□□□ -0.85
SYN3-211ENST00000472027 LRRN2O75325 713 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 ECI2O75521 394 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 FGF19O95750 216 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 ASS1P00966 412 aaKnown RBP9.77□□□□□ -0.85
SYN3-211ENST00000472027 PDGFBP01127 241 aaPredicted RBP9.77□□□□□ -0.85
SYN3-211ENST00000472027 CSH1P0DML2 217 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 CSH2P0DML3 217 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 SRFP11831 508 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 HMGA1P17096 107 aaKnown RBP9.77□□□□□ -0.85
SYN3-211ENST00000472027 BDNFP23560 247 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 RPL10AP62906 217 aaKnown RBP9.77□□□□□ -0.85
SYN3-211ENST00000472027 GPC5P78333 572 aa9.77□□□□□ -0.85
SYN3-211ENST00000472027 MDH1BQ5I0G3 518 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms