RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 ALDH1A3P47895 512 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 INCA1Q0VD86 236 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 DUSP4Q13115 394 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 ANO6Q4KMQ2 910 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 TCP11X2Q5H9J9 407 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 FAM171BQ6P995 826 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 LRRTM3Q86VH5 581 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 ATAD1Q8NBU5 361 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 ZNF707Q96C28 371 aaPredicted RBP16.13■□□□□ 0.17
SNX13-205ENST00000471744 NT5C1BQ96P26 610 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 PKMYT1Q99640 499 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 TUBGCP2Q9BSJ2 902 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
SNX13-205ENST00000471744 PRUNE2Q8WUY3 3088 aa16.13■□□□□ 0.17
SNX13-205ENST00000471744 VNN2O95498 520 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 LMO2P25791 158 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 RAP1GAPP47736 663 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 CDH8P55286 799 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 CFAP221Q4G0U5 840 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 CDKAL1Q5VV42 579 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 SPATA2LQ8IUW3 424 aaPredicted RBP16.12■□□□□ 0.17
SNX13-205ENST00000471744 B3GALNT2Q8NCR0 500 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 EHBP1Q8NDI1 1231 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 MYCBPAPQ8TBZ2 947 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 FAM81BQ96LP2 452 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 FUCA2Q9BTY2 467 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 PHF7Q9BWX1 381 aaPredicted RBP16.12■□□□□ 0.17
SNX13-205ENST00000471744 ABI2Q9NYB9 513 aaPredicted RBP16.12■□□□□ 0.17
SNX13-205ENST00000471744 GTF3C4Q9UKN8 822 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 YIPF1Q9Y548 306 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 ASB3Q9Y575 518 aa16.12■□□□□ 0.17
SNX13-205ENST00000471744 EYSQ5T1H1 3165 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 DOCK8Q8NF50 2099 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 CCL16O15467 120 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 WEE2P0C1S8 567 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
SNX13-205ENST00000471744 IL9P15248 144 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 PTPN1P18031 435 aaKnown RBP16.11■□□□□ 0.17
SNX13-205ENST00000471744 MAGEA11P43364 429 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 ZNF165P49910 485 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 NDST1P52848 882 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 EPHB3P54753 998 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 CUL2Q13617 745 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 ZSCAN23Q3MJ62 389 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 MGAT5BQ3V5L5 792 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 VWA3BQ502W6 1294 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 IQCEQ6IPM2 695 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 GBP6Q6ZN66 633 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 ITIH5Q86UX2 942 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 LEMD2Q8NC56 503 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 LMO3Q8TAP4 145 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 ZNF512Q96ME7 567 aaPredicted RBP16.11■□□□□ 0.17
SNX13-205ENST00000471744 NT5C1AQ9BXI3 368 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 SDCBP2Q9H190 292 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 NDST4Q9H3R1 872 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 WDR6Q9NNW5 1121 aaKnown RBP16.11■□□□□ 0.17
SNX13-205ENST00000471744 CRTAC1Q9NQ79 661 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.17
SNX13-205ENST00000471744 FANCLQ9NW38 375 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 GCNT4Q9P109 453 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 ATP8B3O60423 1300 aa16.11■□□□□ 0.17
SNX13-205ENST00000471744 MYBPHLA2RUH7 354 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 LRRN2O75325 713 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 CILPO75339 1184 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 PTPN2P17706 415 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 PSMC1P62191 440 aaKnown RBP16.1■□□□□ 0.17
SNX13-205ENST00000471744 RPL10AP62906 217 aaKnown RBP16.1■□□□□ 0.17
SNX13-205ENST00000471744 GCNT1Q02742 428 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 TWF1Q12792 350 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 VEPH1Q14D04 833 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 EXOC3L4Q17RC7 722 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 MDH1BQ5I0G3 518 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 VSTM1Q6UX27 236 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 ADHFE1Q8IWW8 467 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 CRYBG2Q8N1P7 616 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 AOPEPQ8N6M6 819 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 TATDN2Q93075 761 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 MYLPFQ96A32 169 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 ELMO3Q96BJ8 720 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 CEP295NLQ96MC4 621 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 SEPT5Q99719 369 aaPredicted RBP16.1■□□□□ 0.17
SNX13-205ENST00000471744 INTS2Q9H0H0 1204 aaKnown RBP16.1■□□□□ 0.17
SNX13-205ENST00000471744 POMKQ9H5K3 350 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 AVENQ9NQS1 362 aaPredicted RBP16.1■□□□□ 0.17
SNX13-205ENST00000471744 TMLHEQ9NVH6 421 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 USTQ9Y2C2 406 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 NR2E1Q9Y466 385 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 NOTCH4Q99466 2003 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 CLUHO75153 1309 aa16.1■□□□□ 0.17
SNX13-205ENST00000471744 TTC28Q96AY4 2481 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 BECN2A8MW95 431 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 HCRTO43612 131 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 ATP2C2O75185 946 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 CDK11BP21127 795 aaKnown RBP16.09■□□□□ 0.17
SNX13-205ENST00000471744 CYP27A1Q02318 531 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 NCAPHQ15003 741 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 HSP90AA4PQ58FG1 418 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 ENOSF1Q7L5Y1 443 aa16.09■□□□□ 0.17
SNX13-205ENST00000471744 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms