RNA–Protein interactions for RNA: ENST00000471247.5

CCNL1-214, Transcript of cyclin L1, humanhuman

TSL 1 (best)

Gene CCNL1, Length 3,671 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNL1-214ENST00000471247 KCNA3P22001 575 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CXCR5P32302 372 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RAB27AP51159 221 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 MRPS15P82914 257 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 POU4F1Q01851 419 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SLC39A6Q13433 755 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ACAP1Q15027 740 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 KCTD19Q17RG1 926 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 TKFCQ3LXA3 575 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 C6orf163Q5TEZ5 329 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 DPY19L2P1Q6NXN4 242 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CCDC129Q6ZRS4 1044 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ZNF662Q6ZS27 426 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CDH24Q86UP0 819 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RAVER1Q8IY67 606 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ANKRD13CQ8N6S4 541 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 C7orf57Q8NEG2 295 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CFAP61Q8NHU2 1237 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SMCR8Q8TEV9 937 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SUCLG2Q96I99 432 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ZNF496Q96IT1 587 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CCDC43Q96MW1 224 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CCT7Q99832 543 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SH3GL2Q99962 352 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 GORASP1Q9BQQ3 440 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SLC39A3Q9BRY0 314 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CELF4Q9BZC1 486 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 VCPKMTQ9H867 229 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 IFT122Q9HBG6 1241 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CARD8Q9Y2G2 431 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CYP46A1Q9Y6A2 500 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ELP1O95163 1332 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SCN8AQ9UQD0 1980 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 FAM86C2PA6NEL3 165 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ZNF561-AS1K7EIQ3 104 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 NDC80O14777 642 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SGSM2O43147 1006 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SRGAP2O75044 1071 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RTN3O95197 1032 aaPredicted RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SDSP20132 328 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 PHBP35232 272 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 IGFALSP35858 605 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 GDNFP39905 211 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CCT6AP40227 531 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SLCO1A2P46721 670 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 LSSP48449 732 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CCT4P50991 539 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 GALK1P51570 392 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 APBA1Q02410 837 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 GHRHRQ02643 423 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ITGA7Q13683 1181 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ATP1A4Q13733 1029 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 CARTPTQ16568 116 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ARHGAP44Q17R89 818 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RILPL1Q5EBL4 403 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RNF220Q5VTB9 566 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ATL3Q6DD88 541 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 HHIPL2Q6UWX4 724 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SHISA5Q8N114 240 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 FIBCD1Q8N539 461 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 WDR60Q8WVS4 1066 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ASB11Q8WXH4 323 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ZNF653Q96CK0 615 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RBM41Q96IZ5 413 aaKnown RBP3.03□□□□□ -1.92
CCNL1-214ENST00000471247 TSNARE1Q96NA8 513 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 WDR24Q96S15 920 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 MPHOSPH8Q99549 860 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 ARPC5LQ9BPX5 153 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 LZTS2Q9BRK4 669 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 RNPEPQ9H4A4 650 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 MMRN2Q9H8L6 949 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 VPS37BQ9H9H4 285 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 PLEKHA5Q9HAU0 1116 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 BATF3Q9NR55 127 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.03□□□□□ -1.922e-7■□□□□ 11
CCNL1-214ENST00000471247 UCKL1Q9NWZ5 548 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 PALD1Q9ULE6 856 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 PPP2R2CQ9Y2T4 447 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 DAGLAQ9Y4D2 1042 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 SCINQ9Y6U3 715 aa3.03□□□□□ -1.92
CCNL1-214ENST00000471247 IGKV6D-41A0A0C4DH26 115 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 NPHP3-ACAD11A0A0J9YXS1 232 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 STXBP3O00186 592 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 CBX4O00257 560 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 TRAF5O00463 557 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 RNGTTO60942 597 aaKnown RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 COBLO75128 1261 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 CCDC159P0C7I6 412 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 ALDH3A1P30838 453 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 NLRP5P59047 1200 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 ERVFRD-1P60508 538 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 LLGL1Q15334 1064 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 TOMM20Q15388 145 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SPA17Q15506 151 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 KYNUQ16719 465 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 KIAA0753Q2KHM9 967 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 SLC35G1Q2M3R5 365 aa3.03□□□□□ -1.93
CCNL1-214ENST00000471247 BEND6Q5SZJ8 279 aaPredicted RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 RBM20Q5T481 1227 aaKnown RBP3.03□□□□□ -1.93
CCNL1-214ENST00000471247 C8orf74Q6P047 294 aa3.03□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms