RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 SLC14A1Q13336 389 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 SLC10A6Q3KNW5 377 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 C2orf27AQ580R0 203 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 MPZL3Q6UWV2 235 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 DSTYKQ6XUX3 929 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 RABEPKQ7Z6M1 372 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 MON1AQ86VX9 555 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 OSCP1Q8WVF1 389 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 TCHPQ9BT92 498 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 TARS2Q9BW92 718 aaKnown RBP13.03□□□□□ -0.32
LSM2-209ENST00000470083 DNAAF2Q9NVR5 837 aaKnown RBP13.03□□□□□ -0.32
LSM2-209ENST00000470083 DUS2Q9NX74 493 aaKnown RBP13.03□□□□□ -0.32
LSM2-209ENST00000470083 CIZ1Q9ULV3 898 aaPredicted RBP13.03□□□□□ -0.32
LSM2-209ENST00000470083 TENM4Q6N022 2769 aa13.03□□□□□ -0.32
LSM2-209ENST00000470083 TRIP11Q15643 1979 aa13.02□□□□□ -0.32
LSM2-209ENST00000470083 A0A087WV48 116 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 CYSRT1A8MQ03 144 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 K7EQS6 105 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 SH3BP5O60239 455 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 F11P03951 625 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 HNRNPLP14866 589 aaKnown RBP eCLIP13.02□□□□□ -0.33
LSM2-209ENST00000470083 SEC13P55735 322 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 BYSLQ13895 437 aaKnown RBP13.02□□□□□ -0.33
LSM2-209ENST00000470083 TOB2Q14106 344 aaPredicted RBP13.02□□□□□ -0.33
LSM2-209ENST00000470083 MAP7D1Q3KQU3 841 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 BMP2KLQ5H9B9 411 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TXNDC8Q6A555 127 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TAS1R3Q7RTX0 852 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TTC30AQ86WT1 665 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TMEM130Q8N3G9 435 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 CCDC33Q8N5R6 958 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 FRMD1Q8N878 549 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 PNPLA1Q8N8W4 532 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 OR10T2Q8NGX3 314 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 GIPC2Q8TF65 315 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TNFRSF25Q93038 417 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 ZNF274Q96GC6 653 aaPredicted RBP13.02□□□□□ -0.33
LSM2-209ENST00000470083 CAMK1GQ96NX5 476 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 TMEM134Q9H6X4 195 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 POLD4Q9HCU8 107 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 GJB4Q9NTQ9 266 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 ARHGAP28Q9P2N2 729 aa13.02□□□□□ -0.33
LSM2-209ENST00000470083 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 ODC1P11926 461 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 HARSP12081 509 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 PLA2G2AP14555 144 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 HMGA1P17096 107 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 CYP3A5P20815 502 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 RPA1P27694 616 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 PSMA5P28066 241 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 NPTX2P47972 431 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 IFNAR2P48551 515 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 MRPS21P82921 87 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 FAM160A1Q05DH4 1040 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 USP4Q13107 963 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 NR1H3Q13133 447 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 NR5A1Q13285 461 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 ZNF77Q15935 545 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 EML3Q32P44 896 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 SLC39A12Q504Y0 691 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 OR2I1PQ8NGU4 316 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 C2orf15Q8WU43 125 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 SLC39A7Q92504 469 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 MRPS31Q92665 395 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 PLEKHA5Q9HAU0 1116 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 APOBEC2Q9Y235 224 aaKnown RBP13.01□□□□□ -0.33
LSM2-209ENST00000470083 PCDHB9Q9Y5E1 797 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 WNT6Q9Y6F9 365 aa13.01□□□□□ -0.33
LSM2-209ENST00000470083 STK36Q9NRP7 1315 aa13□□□□□ -0.33
LSM2-209ENST00000470083 CCDC169A6NNP5 214 aa13□□□□□ -0.33
LSM2-209ENST00000470083 AP5Z1O43299 807 aa13□□□□□ -0.33
LSM2-209ENST00000470083 GJB3O75712 270 aa13□□□□□ -0.33
LSM2-209ENST00000470083 CDKL5O76039 1030 aa13□□□□□ -0.33
LSM2-209ENST00000470083 SYPP08247 313 aa13□□□□□ -0.33
LSM2-209ENST00000470083 CXCL8P10145 99 aa13□□□□□ -0.33
LSM2-209ENST00000470083 PEX3P56589 373 aa13□□□□□ -0.33
LSM2-209ENST00000470083 SMARCB1Q12824 385 aa13□□□□□ -0.33
LSM2-209ENST00000470083 DMP1Q13316 513 aaPredicted RBP13□□□□□ -0.33
LSM2-209ENST00000470083 NBR1Q14596 966 aa13□□□□□ -0.33
LSM2-209ENST00000470083 NOLC1Q14978 699 aaKnown RBP eCLIP13□□□□□ -0.331e-7■□□□□ 11
LSM2-209ENST00000470083 ZBTB6Q15916 424 aa13□□□□□ -0.33
LSM2-209ENST00000470083 HSF5Q4G112 596 aaPredicted RBP13□□□□□ -0.33
LSM2-209ENST00000470083 TOGARAM2Q6ZUX3 1019 aa13□□□□□ -0.33
LSM2-209ENST00000470083 GLRX5Q86SX6 157 aa13□□□□□ -0.33
LSM2-209ENST00000470083 NAXDQ8IW45 347 aa13□□□□□ -0.33
LSM2-209ENST00000470083 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
LSM2-209ENST00000470083 CRELD1Q96HD1 420 aa13□□□□□ -0.33
LSM2-209ENST00000470083 ZCWPW1Q9H0M4 648 aa13□□□□□ -0.33
LSM2-209ENST00000470083 POLMQ9NP87 494 aaPredicted RBP13□□□□□ -0.33
LSM2-209ENST00000470083 BCCIPQ9P287 314 aaKnown RBP eCLIP13□□□□□ -0.33
LSM2-209ENST00000470083 UBQLN1Q9UMX0 589 aaKnown RBP13□□□□□ -0.33
LSM2-209ENST00000470083 ANTXRLA6NF34 631 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 WNT7AO00755 349 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 TOM1L1O75674 476 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 HAPLN1P10915 354 aaPredicted RBP12.99□□□□□ -0.33
LSM2-209ENST00000470083 CHRM1P11229 460 aaPredicted RBP12.99□□□□□ -0.33
LSM2-209ENST00000470083 KRT2P35908 639 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 OPRD1P41143 372 aa12.99□□□□□ -0.33
LSM2-209ENST00000470083 PI4KAP42356 2102 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms