RNA–Protein interactions for RNA: ENST00000467733.1

SSR3-204, Transcript of signal sequence receptor subunit 3, humanhuman

TSL 2

Gene SSR3, Length 873 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR3-204ENST00000467733 SPICE1Q8N0Z3 855 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 REPS2Q8NFH8 660 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 NEK9Q8TD19 979 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 THAP3Q8WTV1 239 aaPredicted RBP4.94□□□□□ -1.62
SSR3-204ENST00000467733 CACTINQ8WUQ7 758 aaKnown RBP4.94□□□□□ -1.62
SSR3-204ENST00000467733 PTPRN2Q92932 1015 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 NEUROD6Q96NK8 337 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 TEX13BQ9BXU2 312 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 UPF3BQ9BZI7 483 aaKnown RBP4.94□□□□□ -1.62
SSR3-204ENST00000467733 ALDH8A1Q9H2A2 487 aaPredicted RBP4.94□□□□□ -1.62
SSR3-204ENST00000467733 ABHD16BQ9H3Z7 469 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 VCPKMTQ9H867 229 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 FBXO28Q9NVF7 368 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 HDAC5Q9UQL6 1122 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 TMX2Q9Y320 296 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 USP24Q9UPU5 2620 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 ANKRD11Q6UB99 2663 aaPredicted RBP4.94□□□□□ -1.62
SSR3-204ENST00000467733 DNAH14Q0VDD8 3507 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 ASTN1O14525 1302 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 TNKSO95271 1327 aa4.94□□□□□ -1.62
SSR3-204ENST00000467733 FAM208BQ5VWN6 2430 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 LCHNA4D1U4 455 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 BLACEA4D250 179 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 ZNF839A8K0R7 811 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 ZEB2O60315 1214 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 SUPT20HL2P0C7V6 817 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 ZNF888P0CJ79 500 aaPredicted RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 GRK2P25098 689 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 GRK3P35626 688 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 PLCD1P51178 756 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 ERVK-21P61565 698 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 GABREP78334 506 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 PFKPQ01813 784 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 TCF15Q12870 199 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 TUSC3Q13454 348 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 MTX1Q13505 466 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 SNRNP48Q6IEG0 339 aaKnown RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 TMED8Q6PL24 325 aaPredicted RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 KCNT2Q6UVM3 1135 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 OTOP3Q7RTS5 596 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 BMP8AQ7Z5Y6 402 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 MIGA1Q8NAN2 632 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 UHMK1Q8TAS1 419 aaKnown RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 NEU4Q8WWR8 484 aaPredicted RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 CLEC4DQ8WXI8 215 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 PLEKHG4BQ96PX9 1271 aa4.93□□□□□ -1.62
SSR3-204ENST00000467733 TGS1Q96RS0 853 aaKnown RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 AURKAIP1Q9NWT8 199 aaPredicted RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 MRPS23Q9Y3D9 190 aaKnown RBP4.93□□□□□ -1.62
SSR3-204ENST00000467733 C11orf97A0A1B0GVM6 126 aaPredicted RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 TMEM221A6NGB7 291 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 FAM47E-STBD1D6RA91 191 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 H3BQ06 376 aaPredicted RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 M0R296 226 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 CDC14BO60729 498 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 CYP2C9P11712 490 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 RPS19P39019 145 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 WDR5P61964 334 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 PSMC6P62333 389 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 DGCR2P98153 550 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 TNFAIP2Q03169 654 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 SPIRE1Q08AE8 756 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 TUBA3CQ13748 450 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 NTRK3Q16288 839 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 C2orf27AQ580R0 203 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 TTC39AQ5SRH9 613 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 TUBA3EQ6PEY2 450 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 Q6ZSN1 163 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 MTDHQ86UE4 582 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 SUGP1Q8IWZ8 645 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 PABPC5Q96DU9 382 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 MRPL38Q96DV4 380 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 SCYL1Q96KG9 808 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 JAM3Q9BX67 310 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 FTOQ9C0B1 505 aaKnown RBP eCLIP4.92□□□□□ -1.62
SSR3-204ENST00000467733 ALG13Q9NP73 1137 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 PIH1D3Q9NQM4 214 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 TRMT13Q9NUP7 481 aaKnown RBP4.92□□□□□ -1.62
SSR3-204ENST00000467733 FBXO40Q9UH90 709 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 MUTYHQ9UIF7 546 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 MTUS1Q9ULD2 1270 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 OTOGLQ3ZCN5 2332 aa4.92□□□□□ -1.62
SSR3-204ENST00000467733 LINC01553A4QN01 128 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 PROB1E7EW31 1015 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 ATP2A1O14983 1001 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 EFCAB14O75071 495 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 IDH1O75874 414 aaKnown RBP4.91□□□□□ -1.62
SSR3-204ENST00000467733 GJB5O95377 273 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 C1SP09871 688 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 GNAT1P11488 350 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 MAKP20794 623 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 DEFB103AP81534 67 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 TOP3AQ13472 1001 aaPredicted RBP4.91□□□□□ -1.62
SSR3-204ENST00000467733 BFSP2Q13515 415 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 PTPROQ16827 1216 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 RNF151Q2KHN1 245 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 FAM83BQ5T0W9 1011 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 FOXB2Q5VYV0 432 aa4.91□□□□□ -1.62
SSR3-204ENST00000467733 NOL8Q76FK4 1167 aaKnown RBP4.91□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 133.2 ms