RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 DSEQ9UL01 958 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 ODF2LQ9ULJ1 636 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 NOL7Q9UMY1 257 aaKnown RBP13.19□□□□□ -0.3
UBR4-211ENST00000467272 C2CD2Q9Y426 696 aa13.19□□□□□ -0.3
UBR4-211ENST00000467272 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 GCN1Q92616 2671 aaKnown RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 CCDC192P0DO97 292 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 TCF3P15923 654 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 HMGN5P82970 282 aaKnown RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 GTF2BQ00403 316 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 VEPH1Q14D04 833 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 PDGFRLQ15198 375 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 ZNF77Q15935 545 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 MGAT5BQ3V5L5 792 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 RNF43Q68DV7 783 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 TXNDC8Q6A555 127 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 UNQ6494/PRO21346Q6UXR6 183 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 RASSF3Q86WH2 238 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 MAB21L3Q8N8X9 362 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 GIPC2Q8TF65 315 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 LEO1Q8WVC0 666 aaPredicted RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 GATA6Q92908 595 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 HHIPQ96QV1 700 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 P2RY13Q9BPV8 354 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 REEP2Q9BRK0 252 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 ASB7Q9H672 318 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 RPF1Q9H9Y2 349 aaKnown RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 LARSQ9P2J5 1176 aaKnown RBP13.18□□□□□ -0.3
UBR4-211ENST00000467272 ZMIZ1Q9ULJ6 1067 aa13.18□□□□□ -0.3
UBR4-211ENST00000467272 C4orf47A7E2U8 309 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 ANKRD63C9JTQ0 380 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 HNRNPDLO14979 420 aaKnown RBP13.17□□□□□ -0.3
UBR4-211ENST00000467272 NOL4O94818 638 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 APBB3O95704 486 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 CSRP1P21291 193 aaKnown RBP13.17□□□□□ -0.3
UBR4-211ENST00000467272 AVPR1AP37288 418 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 LIG4P49917 911 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 CDR1P51861 262 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 USP4Q13107 963 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 TMEM132DQ14C87 1099 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 GAB4Q2WGN9 574 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 EML3Q32P44 896 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 WSCD1Q658N2 575 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 PMS2CLQ68D20 193 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 CRELD2Q6UXH1 353 aaPredicted RBP13.17□□□□□ -0.3
UBR4-211ENST00000467272 OSCP1Q8WVF1 389 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 SLC22A12Q96S37 553 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 EDEM2Q9BV94 578 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 ST6GALNAC4Q9H4F1 302 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 ECT2Q9H8V3 914 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 BLOC1S4Q9NUP1 217 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 GCNT4Q9P109 453 aa13.17□□□□□ -0.3
UBR4-211ENST00000467272 SETXQ7Z333 2677 aaKnown RBP13.16□□□□□ -0.3
UBR4-211ENST00000467272 CYB561D2O14569 222 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 SLC26A4O43511 780 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 RHOBTB1O94844 696 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 SEC24BO95487 1268 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 CAVIN2O95810 425 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 HOXB3P14651 431 aaPredicted RBP13.16□□□□□ -0.3
UBR4-211ENST00000467272 ADSSP30520 456 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 GPR15P49685 360 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 NOVA1P51513 510 aaKnown RBP13.16□□□□□ -0.3
UBR4-211ENST00000467272 AMPD2Q01433 879 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 DMC1Q14565 340 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 KARSQ15046 597 aaKnown RBP13.16□□□□□ -0.3
UBR4-211ENST00000467272 EFCAB13Q8IY85 973 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 RPLP0P6Q8NHW5 317 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 OLIG1Q8TAK6 271 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 KIF2CQ99661 725 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 MSTO1Q9BUK6 570 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 STRA6Q9BX79 667 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 ABCB6Q9NP58 842 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 SCN1AP35498 2009 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 KIAA1549LQ6ZVL6 1849 aa13.16□□□□□ -0.3
UBR4-211ENST00000467272 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 ANTXRLA6NF34 631 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 TISP43B9A030 160 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 K7EQS6 105 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 TOP3BO95985 862 aaKnown RBP13.15□□□□□ -0.3
UBR4-211ENST00000467272 CEACAM1P13688 526 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 KCNA4P22459 653 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 TAF6P49848 677 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 ZXDBP98169 803 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 MTF1Q14872 753 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 ELF2Q15723 593 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 SH3PXD2AQ5TCZ1 1133 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 ARL6IP4Q66PJ3 421 aaKnown RBP13.15□□□□□ -0.3
UBR4-211ENST00000467272 SCARA3Q6AZY7 606 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 LIMS2Q7Z4I7 341 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 USP33Q8TEY7 942 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 CD101Q93033 1021 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 BICD1Q96G01 975 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 GCNAQ96QF7 691 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 PYM1Q9BRP8 204 aaKnown RBP13.15□□□□□ -0.3
UBR4-211ENST00000467272 TMEM206Q9H813 350 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 DPP3Q9NY33 737 aa13.15□□□□□ -0.3
UBR4-211ENST00000467272 PCDHB5Q9Y5E4 795 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms