RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 DAB2IPQ5VWQ8 1189 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 LCLAT1Q6UWP7 414 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 CPXM1Q96SM3 734 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 FAM204AQ9H8W3 233 aa21.65■■□□□ 1.06
CCDC78-207ENST00000466708 HSD17B3P37058 310 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 GYS2P54840 703 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 TMC3Q7Z5M5 1100 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 XYLT1Q86Y38 959 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 TRPV1Q8NER1 839 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 SPC25Q9HBM1 224 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 SNX24Q9Y343 169 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 HES2Q9Y543 173 aa21.64■■□□□ 1.06
CCDC78-207ENST00000466708 PDCD11Q14690 1871 aaKnown RBP21.64■■□□□ 1.05
CCDC78-207ENST00000466708 DCAF8L1A6NGE4 600 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 F8VP50 259 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 ALDH1A1P00352 501 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 KCNE1P15382 129 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 PSMC4P43686 418 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 OGDHQ02218 1023 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 NFX1Q12986 1120 aaKnown RBP21.64■■□□□ 1.05
CCDC78-207ENST00000466708 PDCLQ13371 301 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 CCNG2Q16589 344 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 GNASQ5JWF2 1037 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 POLNQ7Z5Q5 900 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 UNC93AQ86WB7 457 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 C1orf54Q8WWF1 131 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 MCRS1Q96EZ8 462 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 DCLK3Q9C098 648 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 UPF3AQ9H1J1 476 aaKnown RBP21.64■■□□□ 1.05
CCDC78-207ENST00000466708 GRHL1Q9NZI5 618 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 TUBGCP4Q9UGJ1 667 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 SNX9Q9Y5X1 595 aa21.64■■□□□ 1.05
CCDC78-207ENST00000466708 GOLGA6CA6NDK9 693 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 GOLGA8SH3BPF8 625 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 GOLGA6DP0CG33 693 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 RFC1P35251 1148 aaPredicted RBP21.63■■□□□ 1.05
CCDC78-207ENST00000466708 KCNJ1P48048 391 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 ACAP1Q15027 740 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 UBXN11Q5T124 520 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 C9orf57Q5W0N0 161 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 ATL2Q8NHH9 583 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 IPO4Q8TEX9 1081 aaKnown RBP21.63■■□□□ 1.05
CCDC78-207ENST00000466708 CXCL16Q9H2A7 254 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 GOLGA6AQ9NYA3 693 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 ABT1Q9ULW3 272 aaKnown RBP21.63■■□□□ 1.05
CCDC78-207ENST00000466708 PLAAQ9Y263 795 aa21.63■■□□□ 1.05
CCDC78-207ENST00000466708 SCN1AP35498 2009 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PPFIA2O75334 1257 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 ERBB2P04626 1255 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PSMA2P25787 234 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PTPN7P35236 360 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 FLT3P36888 993 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PNPLA4P41247 253 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 RPL21P46778 160 aaKnown RBP21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PLTPP55058 493 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 NKX3-2P78367 333 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 DHX9Q08211 1270 aaKnown RBP21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PPP1R7Q15435 360 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 ODF2Q5BJF6 829 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 C18orf25Q96B23 403 aaPredicted RBP21.62■■□□□ 1.05
CCDC78-207ENST00000466708 HERPUD2Q9BSE4 406 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 ZKSCAN7Q9P0L1 754 aaPredicted RBP21.62■■□□□ 1.05
CCDC78-207ENST00000466708 MTRF1LQ9UGC7 380 aaKnown RBP21.62■■□□□ 1.05
CCDC78-207ENST00000466708 SMIM28A0A1B0GU29 152 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 M0QZ92 97 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 GAS8O95995 478 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 CYP3A5P20815 502 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 AKAP5P24588 427 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 GJC1P36383 396 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 LLGL1Q15334 1064 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 ZDHHC24Q6UX98 284 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 RSPH3Q86UC2 560 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 FAM76AQ8TAV0 307 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 ZNF560Q96MR9 790 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 SLITRK1Q96PX8 696 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 APOL6Q9BWW8 343 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 HEMGNQ9BXL5 484 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 TXLNGYQ9BZA5 131 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 CHST7Q9NS84 486 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 GTF2IRD1Q9UHL9 959 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 TSPAN16Q9UKR8 245 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 PTPN22Q9Y2R2 807 aa21.62■■□□□ 1.05
CCDC78-207ENST00000466708 MYADML2A6NDP7 307 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 PIRO00625 290 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 TJP3O95049 919 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 KRT1P04264 644 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 RPLP2P05387 115 aaKnown RBP21.61■■□□□ 1.05
CCDC78-207ENST00000466708 SETSIPP0DME0 302 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 MRPS6P82932 125 aaKnown RBP21.61■■□□□ 1.05
CCDC78-207ENST00000466708 UAP1Q16222 522 aaPredicted RBP21.61■■□□□ 1.05
CCDC78-207ENST00000466708 HADHQ16836 314 aaKnown RBP21.61■■□□□ 1.05
CCDC78-207ENST00000466708 GLRA4Q5JXX5 417 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 ZFYVE27Q5T4F4 411 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 FBXO25Q8TCJ0 367 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 TRIB2Q92519 343 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 RNF25Q96BH1 459 aaPredicted RBP21.61■■□□□ 1.05
CCDC78-207ENST00000466708 DNAI2Q9GZS0 605 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 TJP2Q9UDY2 1190 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 SCN10AQ9Y5Y9 1956 aa21.61■■□□□ 1.05
CCDC78-207ENST00000466708 PPEF2O14830 753 aa21.6■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms