RNA–Protein interactions for RNA: ENST00000465980.1

ATG3-203, Transcript of autophagy related 3, humanhuman

TSL 2

Gene ATG3, Length 560 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-203ENST00000465980 STRA6Q9BX79 667 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 ST6GALNAC4Q9H4F1 302 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.19□□□□□ -0.78
ATG3-203ENST00000465980 FNIP2Q9P278 1114 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 ARHGAP28Q9P2N2 729 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 ANKFY1Q9P2R3 1169 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 DPP7Q9UHL4 492 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 TNFSF13BQ9Y275 285 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 USTQ9Y2C2 406 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 PCDHB11Q9Y5F2 797 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 CACNA1IQ9P0X4 2223 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 SCN1AP35498 2009 aa10.19□□□□□ -0.78
ATG3-203ENST00000465980 AP5Z1O43299 807 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 N4BP1O75113 896 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 B3GAT3O94766 335 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 GCNT3O95395 438 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 ZNF18P17022 549 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 MATR3P43243 847 aaKnown RBP eCLIP10.18□□□□□ -0.78
ATG3-203ENST00000465980 CLCNKBP51801 687 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 PMS1P54277 932 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 YARSP54577 528 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 NCKAP1LP55160 1127 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 CREMQ03060 361 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 SOX4Q06945 474 aaPredicted RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 ZCWPW2Q504Y3 356 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 SEZ6Q53EL9 994 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 CDKAL1Q5VV42 579 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 ANKRD40Q6AI12 368 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 MPZL3Q6UWV2 235 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 GET4Q7L5D6 327 aaPredicted RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 ALYREFQ86V81 257 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 UBALD2Q8IYN6 164 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 C3orf58Q8NDZ4 430 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 CMASQ8NFW8 434 aaPredicted RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 NOC3LQ8WTT2 800 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 RSAD2Q8WXG1 361 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 PIK3R5Q8WYR1 880 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 MYADMQ96S97 322 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 TSG101Q99816 390 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 CLSTN3Q9BQT9 956 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 KCTD10Q9H3F6 313 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 PLEKHA4Q9H4M7 779 aa10.18□□□□□ -0.78
ATG3-203ENST00000465980 WDR6Q9NNW5 1121 aaKnown RBP10.18□□□□□ -0.78
ATG3-203ENST00000465980 EP300Q09472 2414 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 F5P12259 2224 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 SMIM28A0A1B0GU29 152 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 H0YCG3 227 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 K7ENM7 598 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 PDXKO00764 312 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 CCL16O15467 120 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 OIP5O43482 229 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 NARSO43776 548 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 PRPF6O94906 941 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 ATP1A3P13637 1013 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 SCP2P22307 547 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 TKTP29401 623 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 AVPR2P30518 371 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 ABCD1P33897 745 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 HOXD13P35453 343 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 DEKP35659 375 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 BRCC3P46736 316 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 SMTNP53814 917 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 NTHL1P78549 312 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 GTF2BQ00403 316 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 ELAVL2Q12926 359 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 STRN3Q13033 797 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 NOLC1Q14978 699 aaKnown RBP eCLIP10.17□□□□□ -0.78
ATG3-203ENST00000465980 KNOP1Q1ED39 458 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 EDRF1Q3B7T1 1238 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 ZC2HC1CQ53FD0 456 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 LIN9Q5TKA1 542 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 LILRA6Q6PI73 481 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 PDZRN4Q6ZMN7 1036 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 HAUS6Q7Z4H7 955 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 NELFCDQ8IXH7 590 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 TMEM130Q8N3G9 435 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 CSGALNACT2Q8N6G5 542 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 TMEM161BQ8NDZ6 487 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 FLCNQ8NFG4 579 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 LNX1Q8TBB1 728 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 KCNN1Q92952 543 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 C18orf25Q96B23 403 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 HVCN1Q96D96 273 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 BICD1Q96G01 975 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 SNX27Q96L92 541 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 ZMAT2Q96NC0 199 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 ACAP3Q96P50 834 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 SRRTQ9BXP5 876 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 KCNH6Q9H252 994 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 MFSD1Q9H3U5 465 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 THAP9Q9H5L6 903 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 KCNK12Q9HB15 430 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 PTPRHQ9HD43 1115 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 TOPORSQ9NS56 1045 aaPredicted RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 SAMSN1Q9NSI8 373 aaKnown RBP10.17□□□□□ -0.78
ATG3-203ENST00000465980 FAM86C1Q9NVL1 165 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 FBXW11Q9UKB1 542 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 FBXL21Q9UKT6 434 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 POLIQ9UNA4 740 aa10.17□□□□□ -0.78
ATG3-203ENST00000465980 TRAF3IP3Q9Y228 551 aa10.17□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms