RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, humanhuman

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-208ENST00000465245 KYAT1Q16773 422 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 SPATA1Q5VX52 437 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 PMS2CLQ68D20 193 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 CYP2U1Q7Z449 544 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 RIN3Q8TB24 985 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 SPPL2BQ8TCT7 592 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 C2orf15Q8WU43 125 aaKnown RBP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 ZCCHC14Q8WYQ9 949 aaKnown RBP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 GATA6Q92908 595 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 FAM212AQ96EL1 285 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 TPSD1Q9BZJ3 242 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 ZCWPW1Q9H0M4 648 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 RPF1Q9H9Y2 349 aaKnown RBP13.02□□□□□ -0.33
TRA2B-208ENST00000465245 EBF1Q9UH73 591 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 KCNG1Q9UIX4 513 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 DSEQ9UL01 958 aa13.02□□□□□ -0.33
TRA2B-208ENST00000465245 PI4KAP42356 2102 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 SRRM3A6NNA2 597 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 HNRNPDLO14979 420 aaKnown RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 F11P03951 625 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 HAPLN1P10915 354 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 CSRP1P21291 193 aaKnown RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 CDC25AP30304 524 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 LIG4P49917 911 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 ST3GAL1Q11201 340 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 ZRSR1Q15695 479 aaKnown RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 UAP1L1Q3KQV9 507 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 C9orf57Q5W0N0 161 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 TXNDC8Q6A555 127 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 JADE1Q6IE81 842 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 TMEM150AQ86TG1 271 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 C11orf74Q86VG3 221 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 METTL23Q86XA0 190 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 THEM5Q8N1Q8 247 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 CPA6Q8N4T0 437 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 MRPS31Q92665 395 aaKnown RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 CD101Q93033 1021 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 TSPAN18Q96SJ8 248 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 ECT2Q9H8V3 914 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 ABI2Q9NYB9 513 aaPredicted RBP13.01□□□□□ -0.33
TRA2B-208ENST00000465245 TBX20Q9UMR3 447 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 INVSQ9Y283 1065 aa13.01□□□□□ -0.33
TRA2B-208ENST00000465245 LOC400499M0QZD8 3231 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 PATE3B3GLJ2 98 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 H0YCG3 227 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 OGTO15294 1046 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 FAM189A1O60320 539 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 NFICP08651 508 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 NCKAP1LP55160 1127 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 SMARCB1Q12824 385 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 ZNF268Q14587 947 aaPredicted RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 MTF1Q14872 753 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 USP39Q53GS9 565 aaKnown RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 KIAA1211LQ6NV74 962 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 STKLD1Q8NE28 680 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 TTC16Q8NEE8 873 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 DEFB124Q8NES8 71 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 TSTD1Q8NFU3 115 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 EZH1Q92800 747 aaPredicted RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 ATP2A3Q93084 1043 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 PYM1Q9BRP8 204 aaKnown RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 DUS2Q9NX74 493 aaKnown RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 MAGED2Q9UNF1 606 aaPredicted RBP13□□□□□ -0.33
TRA2B-208ENST00000465245 CEP192Q8TEP8 1941 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 ADAMTS9Q9P2N4 1935 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 PLXND1Q9Y4D7 1925 aa13□□□□□ -0.33
TRA2B-208ENST00000465245 PCNX2A6NKB5 2137 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 SOBPA7XYQ1 873 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 PIRO00625 290 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CYB561D2O14569 222 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CDX4O14627 284 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 ADRB2P07550 413 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CSH1P0DML2 217 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CSH2P0DML3 217 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 HMGA1P17096 107 aaKnown RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 IFNAR2P48551 515 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 DHPSP49366 369 aaPredicted RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 TMEM132DQ14C87 1099 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 ANO7Q6IWH7 933 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 LRRTM3Q86VH5 581 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 MON1AQ86VX9 555 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CD302Q8IX05 232 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 DCP1BQ8IZD4 617 aaKnown RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 MMTAG2Q9BU76 263 aaKnown RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 MSTO1Q9BUK6 570 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 PPP4R2Q9NY27 417 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 LARSQ9P2J5 1176 aaKnown RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 LHX6Q9UPM6 363 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 PCDHB6Q9Y5E3 794 aa12.99□□□□□ -0.33
TRA2B-208ENST00000465245 SMG1Q96Q15 3661 aaKnown RBP12.99□□□□□ -0.33
TRA2B-208ENST00000465245 CACNA1EQ15878 2313 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 ANO9A1A5B4 782 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 LAD1O00515 517 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 CKMP06732 381 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 BCKDHBP21953 392 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 GPR15P49685 360 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 TAF6P49848 677 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 NEK4P51957 841 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 IRX4P78413 519 aa12.98□□□□□ -0.33
TRA2B-208ENST00000465245 FAM160A1Q05DH4 1040 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 68.7 ms