RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 NPY5RQ15761 445 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 KLHL40Q2TBA0 621 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 KIAA1755Q5JYT7 1200 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 FAM83BQ5T0W9 1011 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 MCTP2Q6DN12 878 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 GALNT17Q6IS24 598 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 BTNL9Q6UXG8 535 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 LCNL1Q6ZST4 164 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 C11orf74Q86VG3 221 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 BLIDQ8IZY5 108 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 ZNF713Q8N859 430 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 CCDC148Q8NFR7 591 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 CCDC12Q8WUD4 166 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 ZKSCAN4Q969J2 545 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 MTMR8Q96EF0 704 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 GLIS2Q9BZE0 524 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 FTOQ9C0B1 505 aaKnown RBP eCLIP8.28□□□□□ -1.08
UBE4B-204ENST00000462658 TMX1Q9H3N1 280 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 AS3MTQ9HBK9 375 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 RTEL1Q9NZ71 1219 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 FZD1Q9UP38 647 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 CLIC4Q9Y696 253 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 ELP1O95163 1332 aa8.28□□□□□ -1.08
UBE4B-204ENST00000462658 UBA6A0AVT1 1052 aaPredicted RBP8.27□□□□□ -1.09
UBE4B-204ENST00000462658 GOLGA6L4A6NEF3 574 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 SMCO2A6NFE2 343 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 MBD3O95983 291 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 KNG1P01042 644 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 GNA11P29992 359 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 NF2P35240 595 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 STAT2P52630 851 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 SLURP1P55000 103 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 SLC6A3Q01959 620 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 ALDH6A1Q02252 535 aaKnown RBP8.27□□□□□ -1.09
UBE4B-204ENST00000462658 EPHA7Q15375 998 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 RILPL1Q5EBL4 403 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 SYDE2Q5VT97 1194 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 BROXQ5VW32 411 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 ANO1Q5XXA6 986 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 DDX42Q86XP3 938 aaKnown RBP eCLIP8.27□□□□□ -1.09
UBE4B-204ENST00000462658 KRTAP19-1Q8IUB9 90 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 LINC00301Q8NCQ3 95 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 NUDT10Q8NFP7 164 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 ATL2Q8NHH9 583 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 GPT2Q8TD30 523 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 CHURC1Q8WUH1 139 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 COA7Q96BR5 231 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 NUDT11Q96G61 164 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 BTBD2Q9BX70 525 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 KIAA1683Q9H0B3 1180 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 ZMYND12Q9H0C1 365 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 L2HGDHQ9H9P8 463 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 C6orf50Q9HD87 102 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 FEM1BQ9UK73 627 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 SSC5DA1L4H1 1573 aa8.27□□□□□ -1.09
UBE4B-204ENST00000462658 THSD7BQ9C0I4 1608 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 ESYT2A0FGR8 921 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 ADAMTS3O15072 1205 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SPTLC2O15270 562 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 ZEB2O60315 1214 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 PLA2G6O60733 806 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 CYP7B1O75881 506 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 YEATS4O95619 227 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 PRLP01236 227 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 TOB1P50616 345 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 USP14P54578 494 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SNAP25P60880 206 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 TMPRSS15P98073 1019 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SPP2Q13103 211 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SLC39A14Q15043 492 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 STK38Q15208 465 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 TERF2Q15554 542 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 CDC37Q16543 378 aaPredicted RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 QRICH1Q2TAL8 776 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 EARS2Q5JPH6 523 aaKnown RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 FAM160B2Q86V87 743 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 BICD2Q8TD16 824 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 KCNG4Q8TDN1 519 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 ADAMTS17Q8TE56 1095 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 LPAR1Q92633 364 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SLC5A5Q92911 643 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 CDCA5Q96FF9 252 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 TUBGCP5Q96RT8 1024 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 SEMA4AQ9H3S1 761 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 NOL7Q9UMY1 257 aaKnown RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 PCDHA6Q9UN73 950 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 APOBEC2Q9Y235 224 aaKnown RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 COL4A3BPQ9Y5P4 624 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 ZHX2Q9Y6X8 837 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 BAZ2BQ9UIF8 2168 aaKnown RBP8.26□□□□□ -1.09
UBE4B-204ENST00000462658 MYH4Q9Y623 1939 aa8.26□□□□□ -1.09
UBE4B-204ENST00000462658 C19orf81C9J6K1 198 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 WDR46O15213 610 aaKnown RBP8.25□□□□□ -1.09
UBE4B-204ENST00000462658 TRIM13O60858 407 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 ADCY8P40145 1251 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 ME1P48163 572 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 ADCY7P51828 1080 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 BACE1P56817 501 aa8.25□□□□□ -1.09
UBE4B-204ENST00000462658 CD83Q01151 205 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms