RNA–Protein interactions for RNA: ENST00000462637.5

PCCB-204, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene PCCB, Length 1,715 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-204ENST00000462637 PTPN20Q4JDL3 420 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 LRRC38Q5VT99 294 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 KATNAL2Q8IYT4 538 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 CAVIN3Q969G5 261 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 MCEEQ96PE7 176 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.55■□□□□ 0.24
PCCB-204ENST00000462637 RNF39Q9H2S5 420 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 SLC38A7Q9NVC3 462 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 GDAP2Q9NXN4 497 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 KLK14Q9P0G3 267 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 SCN10AQ9Y5Y9 1956 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 CEP350Q5VT06 3117 aa16.55■□□□□ 0.24
PCCB-204ENST00000462637 SIGLEC16A6NMB1 481 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 PPEF2O14830 753 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 CHRNA1P02708 482 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 CTSHP09668 335 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 CETN2P41208 172 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 TAF6P49848 677 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 PSMC1P62191 440 aaKnown RBP16.54■□□□□ 0.24
PCCB-204ENST00000462637 MGAT3Q09327 533 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 MTFR1Q15390 333 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 PTGISQ16647 500 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 ZNF771Q7L3S4 317 aaPredicted RBP16.54■□□□□ 0.24
PCCB-204ENST00000462637 NIPA2Q8N8Q9 360 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 IPO4Q8TEX9 1081 aaKnown RBP16.54■□□□□ 0.24
PCCB-204ENST00000462637 DDX27Q96GQ7 796 aaKnown RBP16.54■□□□□ 0.24
PCCB-204ENST00000462637 RAB17Q9H0T7 212 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 AMACRQ9UHK6 382 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 RASAL2Q9UJF2 1139 aa16.54■□□□□ 0.24
PCCB-204ENST00000462637 UTP11Q9Y3A2 253 aaKnown RBP16.54■□□□□ 0.24
PCCB-204ENST00000462637 KPNA7A9QM74 516 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 BHMG1C9JSJ3 638 aaPredicted RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 FSCN2O14926 492 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 SETSIPP0DME0 302 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 KRT3P12035 628 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 THPOP40225 353 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 GPD2P43304 727 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 GABRB2P47870 512 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 RPL7AP62424 266 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 DR1Q01658 176 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 PTK7Q13308 1070 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 PDCLQ13371 301 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 CYP1B1Q16678 543 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 CYP4A22Q5TCH4 519 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 AADACL2Q6P093 401 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 ADAT2Q7Z6V5 191 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 GSPT2Q8IYD1 628 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 FNIP1Q8TF40 1166 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 CASKIN2Q8WXE0 1202 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 IFT81Q8WYA0 676 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 HINFPQ9BQA5 517 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 MRPL45Q9BRJ2 306 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 FAM105AQ9NUU6 356 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 CYTH4Q9UIA0 394 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 USTQ9Y2C2 406 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 LRPAP1P30533 357 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 SSR1P43307 286 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 CARSP49589 748 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 SNX16P57768 344 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 NFX1Q12986 1120 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 SMC1AQ14683 1233 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 SND1Q7KZF4 910 aaKnown RBP eCLIP16.53■□□□□ 0.24
PCCB-204ENST00000462637 PRELID2Q8N945 189 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 C12orf50Q8NA57 414 aaPredicted RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 EXD1Q8NHP7 514 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 WNT8BQ93098 351 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 MAGOHBQ96A72 148 aaKnown RBP16.53■□□□□ 0.24
PCCB-204ENST00000462637 CPXM1Q96SM3 734 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 FAM114A2Q9NRY5 505 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 PCYOX1Q9UHG3 505 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 TSPAN16Q9UKR8 245 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 NOD1Q9Y239 953 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 NR2E1Q9Y466 385 aa16.53■□□□□ 0.24
PCCB-204ENST00000462637 CITO14578 2027 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 ESYT3A0FGR9 886 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 TTI1O43156 1089 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 CAND2O75155 1236 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 CAPN15O75808 1086 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 GJB6O95452 261 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 FAM163BP0C2L3 166 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 CCL5P13501 91 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 FNTAP49354 379 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 RAB27AP51159 221 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 ACLYP53396 1101 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 ITGA7Q13683 1181 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 SOWAHAQ2M3V2 549 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 GOLGA7BQ2TAP0 167 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 FBXO46Q6PJ61 603 aaPredicted RBP16.52■□□□□ 0.24
PCCB-204ENST00000462637 DPH6Q7L8W6 267 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 XYLT1Q86Y38 959 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 ARRDC4Q8NCT1 418 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 APPL2Q8NEU8 664 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 OR6B3Q8NGW1 331 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 SEC14L1Q92503 715 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 RBM41Q96IZ5 413 aaKnown RBP16.52■□□□□ 0.24
PCCB-204ENST00000462637 PPP1R10Q96QC0 940 aaKnown RBP16.52■□□□□ 0.24
PCCB-204ENST00000462637 UBXN6Q9BZV1 441 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 RNF208Q9H0X6 261 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 SNX25Q9H3E2 840 aa16.52■□□□□ 0.24
PCCB-204ENST00000462637 ERVK-5Q9HDB9 667 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms