RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 ZNF653Q96CK0 615 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SCLT1Q96NL6 688 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 SELENOSQ9BQE4 189 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 MTMR12Q9C0I1 747 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 NSRP1Q9H0G5 558 aaKnown RBP13.18□□□□□ -0.3
COL4A6-204ENST00000461897 APOBEC3GQ9HC16 384 aaKnown RBP13.18□□□□□ -0.3
COL4A6-204ENST00000461897 ACP6Q9NPH0 428 aa13.18□□□□□ -0.3
COL4A6-204ENST00000461897 AVENQ9NQS1 362 aaPredicted RBP13.18□□□□□ -0.3
COL4A6-204ENST00000461897 TLDC2A0PJX2 215 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 GPR32O75388 356 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 CXCL8P10145 99 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 MCF2P10911 925 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 CYP2C9P11712 490 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 ITIH2P19823 946 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 FGFR4P22455 802 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 HOXC8P31273 242 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 CAV1Q03135 178 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 PTP4A2Q12974 167 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 UBAP2Q5T6F2 1119 aaKnown RBP13.17□□□□□ -0.3
COL4A6-204ENST00000461897 MFSD14CQ5VZR4 134 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 ENOSF1Q7L5Y1 443 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 EPS8L3Q8TE67 593 aaKnown RBP13.17□□□□□ -0.3
COL4A6-204ENST00000461897 FAM212AQ96EL1 285 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 FAM81BQ96LP2 452 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.17□□□□□ -0.3
COL4A6-204ENST00000461897 SCN10AQ9Y5Y9 1956 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
COL4A6-204ENST00000461897 TREHO43280 583 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 C6orf222P0C671 652 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 IVDP26440 423 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 PDE6CP51160 858 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 AP3M2P53677 418 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 GJA9P57773 515 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 ZNF200P98182 395 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CALCOCO2Q13137 446 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 NCOA4Q13772 614 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 PTK6Q13882 451 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 SURF1Q15526 300 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CLEC16AQ2KHT3 1053 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 WDR44Q5JSH3 913 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 EXOC3L1Q86VI1 746 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CDHR5Q9HBB8 845 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CREBZFQ9NS37 354 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 HOMER3Q9NSC5 361 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 HAUS2Q9NVX0 235 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 SAMD15Q9P1V8 674 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 A0A1B0GUA9 196 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CFAP73A6NFT4 308 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 ATMINO43313 823 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 B4GALT4O60513 344 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CST3P01034 146 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 ATP5DP30049 168 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 SLC1A1P43005 524 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 NOP14P78316 857 aaKnown RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 SP3Q02447 781 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 RIPK1Q13546 671 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 FAM228AQ86W67 206 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 RELL1Q8IUW5 271 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 MYCBPQ99417 103 aaPredicted RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 OSMRQ99650 979 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 CDC42EP4Q9H3Q1 356 aaKnown RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 RNF186Q9NXI6 227 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 TPX2Q9ULW0 747 aaKnown RBP13.16□□□□□ -0.3
COL4A6-204ENST00000461897 GINS2Q9Y248 185 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 NUB1Q9Y5A7 615 aa13.16□□□□□ -0.3
COL4A6-204ENST00000461897 SEPT4O43236 478 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 SNX3O60493 162 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 PGK1P00558 417 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 CLTAP09496 248 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 STAG3L1P0CL83 205 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 MYBL1P10243 752 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 UNGP13051 313 aaPredicted RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 ACO1P21399 889 aaKnown RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 TFAMQ00059 246 aaKnown RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 CACNB2Q08289 660 aaPredicted RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 CUL2Q13617 745 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 DUOXA2Q1HG44 320 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 TRPM8Q7Z2W7 1104 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 ZNF677Q86XU0 584 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 CPNE8Q86YQ8 564 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 REM2Q8IYK8 340 aaPredicted RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 GRK7Q8WTQ7 553 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 DNAJB3Q8WWF6 145 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 PRMT1Q99873 361 aaKnown RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 UPF3AQ9H1J1 476 aaKnown RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 RPF1Q9H9Y2 349 aaKnown RBP13.15□□□□□ -0.3
COL4A6-204ENST00000461897 CD248Q9HCU0 757 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 NEU2Q9Y3R4 380 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 THSD7BQ9C0I4 1608 aa13.15□□□□□ -0.3
COL4A6-204ENST00000461897 FAM170AA1A519 330 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 C17orf102A2RUQ5 167 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 IL18RAPO95256 599 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 TTC4O95801 387 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 ASS1P00966 412 aaKnown RBP13.14□□□□□ -0.31
COL4A6-204ENST00000461897 NFICP08651 508 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 KRT5P13647 590 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 ELNP15502 786 aa13.14□□□□□ -0.31
COL4A6-204ENST00000461897 HOXA11P31270 313 aaPredicted RBP13.14□□□□□ -0.31
COL4A6-204ENST00000461897 KCNJ1P48048 391 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms