RNA–Protein interactions for RNA: ENST00000461624.1

SPTA1-202, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 2

Gene SPTA1, Length 930 nt, Biotype retained intron, Subcellular localisation Cytosol, Dendrite .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-202ENST00000461624 ABLIM1O14639 778 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 PRAMEF1O95521 474 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 SYPP08247 313 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CT47B1P0C2W7 299 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 TSPY3P0CV98 308 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 TSPY8P0CW00 308 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 SNHG28P0DPA3 235 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 GNAT1P11488 350 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 ITGA4P13612 1032 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 BMP7P18075 431 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 LAG3P18627 525 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 PBX3P40426 434 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 ERVFRD-1P60508 538 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 YBX1P67809 324 aaKnown RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CSTF1Q05048 431 aaKnown RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 SNW1Q13573 536 aaKnown RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 NCAPHQ15003 741 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 WTAPQ15007 396 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CSRP2Q16527 193 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CCDC96Q2M329 555 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 LETM2Q2VYF4 491 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 HEATR6Q6AI08 1181 aaKnown RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 LAIR1Q6GTX8 287 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 VHLLQ6RSH7 139 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 TMC5Q6UXY8 1006 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 LURAP1LQ8IV03 231 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 SIRT2Q8IXJ6 389 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 FAM169BQ8N8A8 192 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 IL31RAQ8NI17 732 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 OSBP2Q969R2 916 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CLDN23Q96B33 292 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 DSCC1Q9BVC3 393 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 PRDM14Q9GZV8 571 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 GBP3Q9H0R5 595 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 PXMP2Q9NR77 195 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 SIRT5Q9NXA8 310 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 TNFRSF10DQ9UBN6 386 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 GMEB2Q9UKD1 530 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 PADI3Q9ULW8 664 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 STX8Q9UNK0 236 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 MTF2Q9Y483 593 aaPredicted RBP6.1□□□□□ -1.43
SPTA1-202ENST00000461624 CDY2AQ9Y6F7 541 aa6.1□□□□□ -1.43
SPTA1-202ENST00000461624 FRMPD2Q68DX3 1309 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 KDM3AQ9Y4C1 1321 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SHISA7A6NL88 538 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 C9IYK1 514 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 ANHXE9PGG2 379 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 LAMTOR5O43504 91 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 TP53P04637 393 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 RETP07949 1114 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 TGFB3P10600 412 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 PDHBP11177 359 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 PI3P19957 117 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 ETFBP38117 255 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 BUD31P41223 144 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 MRPS6P82932 125 aaKnown RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 ZNF543Q08ER8 600 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 HTR4Q13639 388 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SMC1AQ14683 1233 aaKnown RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SSPNQ14714 243 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 CCDC6Q16204 474 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 FXNQ16595 210 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 GALNT18Q6P9A2 607 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 KCNV1Q6PIU1 500 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 DCLRE1AQ6PJP8 1040 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 KCNT2Q6UVM3 1135 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 PPFIBP1Q86W92 1011 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 CKAP2LQ8IYA6 745 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SLC39A11Q8N1S5 342 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 UBE2Q2Q8WVN8 375 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 DNAJB3Q8WWF6 145 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 RELTQ969Z4 430 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 BBC3Q96PG8 261 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 MYADMQ96S97 322 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 PDCD2LQ9BRP1 358 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 FAM126AQ9BYI3 521 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 RHOBTB2Q9BYZ6 727 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 OSBPL6Q9BZF3 934 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.09□□□□□ -1.433e-10■■■□□ 16.5
SPTA1-202ENST00000461624 ZBP1Q9H171 429 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SFXN1Q9H9B4 322 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 ZNF287Q9HBT7 754 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 IL1RAPL2Q9NP60 686 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 CHST7Q9NS84 486 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 RXFP3Q9NSD7 469 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 SPATA6Q9NWH7 488 aaPredicted RBP6.09□□□□□ -1.43
SPTA1-202ENST00000461624 EXOC6BQ9Y2D4 811 aa6.09□□□□□ -1.43
SPTA1-202ENST00000461624 PCNX2A6NKB5 2137 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 TICRRQ7Z2Z1 1910 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 KANSL1LA0AUZ9 987 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 FADS2P1A8MWK0 482 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 N4BP3O15049 544 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 FOXP2O15409 715 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 KCNK5O95279 499 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 CAPNS1P04632 268 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 ATP5JP18859 108 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 NCLP19338 710 aaKnown RBP6.08□□□□□ -1.44
SPTA1-202ENST00000461624 VIPR1P32241 457 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 PPM1AP35813 382 aa6.08□□□□□ -1.44
SPTA1-202ENST00000461624 ARL4AP40617 200 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms