RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 RMDN3Q96TC7 470 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 VKORC1Q9BQB6 163 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 TLR10Q9BXR5 811 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 MEGF9Q9H1U4 602 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 OBP2BQ9NPH6 170 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 DACT1Q9NYF0 836 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 RNF181Q9P0P0 153 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 HESX1Q9UBX0 185 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 EIF2B4Q9UI10 523 aaKnown RBP3.74□□□□□ -1.81
VCL-203ENST00000461383 GTF2A1LQ9UNN4 478 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 SHOC2Q9UQ13 582 aa3.74□□□□□ -1.81
VCL-203ENST00000461383 MTO1Q9Y2Z2 717 aaKnown RBP3.74□□□□□ -1.81
VCL-203ENST00000461383 CCDC195A0A1B0GUA6 201 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 LGALS16A8MUM7 142 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 H7C4K7 107 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RGS10O43665 173 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 PRSS23O95084 383 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RASAL1O95294 804 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 FGAP02671 866 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 SPATA31D3P0C874 917 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 ITGALP20701 1170 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 GCSHP23434 173 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 PDIA3P30101 505 aaKnown RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 MAPK9P45984 424 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 PXNP49023 591 aaPredicted RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 CPT1AP50416 773 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 COPAP53621 1224 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 PTTG1IPP53801 180 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 PRKAG1P54619 331 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 POU5F1BQ06416 359 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 CRHR2Q13324 411 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 CNGB1Q14028 1251 aaPredicted RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 RAB30Q15771 203 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 ALFQ53S48 1182 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 UBXN11Q5T124 520 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 TCTN3Q6NUS6 607 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 LDHAL6AQ6ZMR3 332 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 SPATA31D4Q6ZUB0 917 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RFX8Q6ZV50 586 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 POLNQ7Z5Q5 900 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 ANKRD18AQ8IVF6 992 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 NSUN7Q8NE18 718 aaKnown RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 FEZF2Q8TBJ5 459 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 IPO4Q8TEX9 1081 aaKnown RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 PNISRQ8TF01 805 aaKnown RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 TRAPPC12Q8WVT3 735 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RUBCNQ92622 972 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 C18orf8Q96DM3 657 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 ISCA1Q9BUE6 129 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 GPR87Q9BY21 358 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 UBA5Q9GZZ9 404 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 RNPEPQ9H4A4 650 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 TBC1D30Q9Y2I9 924 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 USP15Q9Y4E8 981 aaPredicted RBP3.73□□□□□ -1.81
VCL-203ENST00000461383 PCDHGB3Q9Y5G1 929 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 SLC30A1Q9Y6M5 507 aa3.73□□□□□ -1.81
VCL-203ENST00000461383 AQP7P3A6NL99 342 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 AQP12BA6NM10 295 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 HMGB1P1B2RPK0 211 aaPredicted RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 PIP5K1BO14986 540 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 CCP110O43303 1012 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 SOAT2O75908 522 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PIAS2O75928 621 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 RECQL4O94761 1208 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GPANK1O95872 356 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PLATP00750 562 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 A1BGP04217 495 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 ADRB1P08588 477 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 HSD3B1P14060 373 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 BTF3P20290 206 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 COMTP21964 271 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 FDXRP22570 491 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GCLCP48506 637 aaPredicted RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 PTDSS1P48651 473 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 LOXL3P58215 753 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 LILRA4P59901 499 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 RNASE9P60153 205 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 HSD11B2P80365 405 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 SLFN5Q08AF3 891 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 SPARCL1Q14515 664 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 CSRP2Q16527 193 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 TIGD6Q17RP2 521 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 SPATS1Q496A3 300 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 HS1BP3Q53T59 392 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 ZFYVE27Q5T4F4 411 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 ARL6IP4Q66PJ3 421 aaKnown RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 CCDC70Q6NSX1 233 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 TAF2Q6P1X5 1199 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 USP17L6PQ6QN14 398 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PPP1R32Q7Z5V6 425 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 PRRT2Q7Z6L0 340 aaPredicted RBP3.72□□□□□ -1.81
VCL-203ENST00000461383 GAS2L3Q86XJ1 694 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GATAD2AQ86YP4 633 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 ZFPM1Q8IX07 1006 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 RHOT2Q8IXI1 618 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 CACNA2D3Q8IZS8 1091 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 SPARTQ8N0X7 666 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 VGLL2Q8N8G2 317 aa3.72□□□□□ -1.81
VCL-203ENST00000461383 GLIS1Q8NBF1 620 aa3.72□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms