RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CIR1Q86X95 450 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 TRIM48Q8IWZ4 208 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 KBTBD2Q8IY47 623 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 C1orf162Q8NEQ5 155 aaPredicted RBP5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 IGDCC4Q8TDY8 1250 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 BRI3BPQ8WY22 251 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 OPTNQ96CV9 577 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 PTPN18Q99952 460 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 LRRC2Q9BYS8 371 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 TCF7L1Q9HCS4 588 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 SLC6A20Q9NP91 592 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 TOMM22Q9NS69 142 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ATP8A2Q9NTI2 1148 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 CROTQ9UKG9 612 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ZBTB21Q9ULJ3 1066 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 ANKRD6Q9Y2G4 727 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 DDX52Q9Y2R4 599 aaKnown RBP eCLIP5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 PPP2R3BQ9Y5P8 575 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 LAMA3Q16787 3333 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 DOCK1Q14185 1865 aa5.47□□□□□ -1.53
ATPAF1-203ENST00000460928 COL2A1P02458 1487 aaPredicted RBP5.46□□□□□ -1.53
ATPAF1-203ENST00000460928 DVL2O14641 736 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 KCNK3O14649 394 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC27A2O14975 620 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 RANBP6O60518 1105 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CFBP00751 764 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CALRP27797 417 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 LSP1P33241 339 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 RECQLP46063 649 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 HMGCS2P54868 508 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 IRF9Q00978 393 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 TFAP4Q01664 338 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 NFATC3Q12968 1075 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SPP2Q13103 211 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 MOGSQ13724 837 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ALX1Q15699 326 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ADCK5Q3MIX3 580 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CERKLQ49MI3 558 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SBK1Q52WX2 424 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 TREML2Q5T2D2 321 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CXorf57Q6NSI4 855 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 TATDN1Q6P1N9 297 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ARHGEF18Q6ZSZ5 1173 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CYB5R4Q7L1T6 521 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 PROSER1Q86XN7 944 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 PTRH1Q86Y79 214 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 RAB11FIP4Q86YS3 637 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 FOXP4Q8IVH2 680 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 TPH2Q8IWU9 490 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SCYL3Q8IZE3 742 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SPICE1Q8N0Z3 855 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 CPA6Q8N4T0 437 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 KIAA1958Q8N8K9 716 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 SLC16A11Q8NCK7 471 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 MAP4K1Q92918 833 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 NUP88Q99567 741 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ELF4Q99607 663 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 NACAP1Q9BZK3 213 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 KLC2Q9H0B6 622 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 DHX36Q9H2U1 1008 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 BARX1Q9HBU1 254 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ARNT2Q9HBZ2 717 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 IL17RBQ9NRM6 502 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 MKS1Q9NXB0 559 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ARPP21Q9UBL0 812 aaPredicted RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 ADAM29Q9UKF5 820 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 NOC2LQ9Y3T9 749 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 PTPRFP10586 1907 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 BAZ2BQ9UIF8 2168 aaKnown RBP5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 LAMA4Q16363 1823 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 RAD50Q92878 1312 aa5.46□□□□□ -1.54
ATPAF1-203ENST00000460928 RBBP6Q7Z6E9 1792 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 HTTP42858 3142 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CCL15-CCL14A0A0B4J2E2 113 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 GOLGA8AA7E2F4 631 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 GOLGA8BA8MQT2 603 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 VGLL3A8MV65 326 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 PATE3B3GLJ2 98 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 E7EWF7 191 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 HIP1O00291 1037 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 NKRFO15226 690 aaKnown RBP eCLIP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 KIF1CO43896 1103 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CTNND1O60716 968 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 MYL1P05976 194 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 RBP3P10745 1247 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 EEF2P13639 858 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 C6P13671 934 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 GNAT2P19087 354 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 TACR2P21452 398 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SCAND1P57086 179 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 ANTXR2P58335 489 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SNAP25P60880 206 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 PHC1P78364 1004 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SMAD3P84022 425 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 GABPB1Q06547 395 aaPredicted RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 BIRC2Q13490 618 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 LRRC32Q14392 662 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 SMAD2Q15796 467 aaKnown RBP5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 CCL15Q16663 113 aa5.45□□□□□ -1.54
ATPAF1-203ENST00000460928 TRMT10BQ6PF06 316 aaKnown RBP5.45□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 103.9 ms