RNA–Protein interactions for RNA: ENST00000460925.1

SF3A3-202, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 793 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-202ENST00000460925 PPIL2Q13356 520 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GBX1Q14549 363 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GRM4Q14833 912 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 CCL15Q16663 113 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 RGMBQ6NW40 437 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 TMTC3Q6ZXV5 915 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 PRRT2Q7Z6L0 340 aaPredicted RBP5.57□□□□□ -1.52
SF3A3-202ENST00000460925 C7orf31Q8N865 590 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 ARRDC4Q8NCT1 418 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 NSUN7Q8NE18 718 aaKnown RBP5.57□□□□□ -1.52
SF3A3-202ENST00000460925 JADE3Q92613 823 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 ANKS1AQ92625 1134 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 SLC39A13Q96H72 371 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 RAX2Q96IS3 184 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GBP4Q96PP9 640 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 MYCBPQ99417 103 aaPredicted RBP5.57□□□□□ -1.52
SF3A3-202ENST00000460925 FOXB1Q99853 325 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 KIAA1683Q9H0B3 1180 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 R3HDMLQ9H3Y0 253 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 AS3MTQ9HBK9 375 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 VAT1LQ9HCJ6 419 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 RRAGDQ9NQL2 400 aaPredicted RBP5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GJB4Q9NTQ9 266 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 MAP3K20Q9NYL2 800 aaKnown RBP5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GPR160Q9UJ42 338 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 ADAMTS6Q9UKP5 1117 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 LIMCH1Q9UPQ0 1083 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 CTNND2Q9UQB3 1225 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 INVSQ9Y283 1065 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 GPR45Q9Y5Y3 372 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 MGAMO43451 1857 aa5.57□□□□□ -1.52
SF3A3-202ENST00000460925 MYH7BA7E2Y1 1941 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PLXNA1Q9UIW2 1896 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 HTTP42858 3142 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 VSTM5A8MXK1 200 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 KLRF2D3W0D1 207 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ADAMTS3O15072 1205 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 XPOTO43592 962 aaKnown RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 FLOT1O75955 427 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PARP1P09874 1014 aaKnown RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CYP2C8P10632 490 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 MTHFD2P13995 350 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ADKP55263 362 aaKnown RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 EVCP57679 992 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 GUCY1B3Q02153 619 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PPATQ06203 517 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 DBPQ10586 325 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 SNAPC2Q13487 334 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ANKRD1Q15327 319 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CCDC178Q5BJE1 867 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 TTC38Q5R3I4 469 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 OTUD7BQ6GQQ9 843 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 TIGD7Q6NT04 549 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CCDC174Q6PII3 467 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 SYNE3Q6ZMZ3 975 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 KANSL1Q7Z3B3 1105 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CILP2Q8IUL8 1156 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ADGRF4Q8IZF3 695 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 FBXL16Q8N461 479 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 FANCBQ8NB91 859 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 GMCL1P1Q8NEA9 526 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CTCFLQ8NI51 663 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 RSAD2Q8WXG1 361 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 SNX21Q969T3 373 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CLIP3Q96DZ5 547 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ZNF274Q96GC6 653 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 CAPNS2Q96L46 248 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PIGSQ96S52 555 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 MAP7D2Q96T17 732 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PTPN18Q99952 460 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 PAGR1Q9BTK6 254 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 SLC26A6Q9BXS9 759 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 ALDH8A1Q9H2A2 487 aaPredicted RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 SEMA4AQ9H3S1 761 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 DNAJC28Q9NX36 388 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 TMPRSS11EQ9UL52 423 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 YBX2Q9Y2T7 364 aaKnown RBP5.56□□□□□ -1.52
SF3A3-202ENST00000460925 NUMBLQ9Y6R0 609 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 BRCA2P51587 3418 aa5.56□□□□□ -1.52
SF3A3-202ENST00000460925 LRRC37A2A6NM11 1700 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 UBA6A0AVT1 1052 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 ZC3H12DA2A288 527 aaKnown RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 CPLX1O14810 134 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 WDR46O15213 610 aaKnown RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 IL33O95760 270 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 PRLP01236 227 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 ASGR2P07307 311 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 RNASE1P07998 156 aaKnown RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 FAM163BP0C2L3 166 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 SKILP12757 684 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 FDPSP14324 419 aaKnown RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 CAPN2P17655 700 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 ITGB7P26010 798 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 GJB2P29033 226 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 TRHRP34981 398 aaPredicted RBP5.55□□□□□ -1.52
SF3A3-202ENST00000460925 PEX19P40855 299 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 MAPKAPK2P49137 400 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 STAT2P52630 851 aa5.55□□□□□ -1.52
SF3A3-202ENST00000460925 C1QTNF8P60827 252 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms