RNA–Protein interactions for RNA: ENST00000460120.5

HPS3-202, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2 BASIC

Gene HPS3, Length 2,745 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-202ENST00000460120 TRPM8Q7Z2W7 1104 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 KIAA0319LQ8IZA0 1049 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 UBA3Q8TBC4 463 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 PPP1R13LQ8WUF5 828 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 ANKRD36BP1Q96IX9 119 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 CPXM1Q96SM3 734 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 CCDC77Q9BR77 488 aa19.12■□□□□ 0.65
HPS3-202ENST00000460120 GRAP2O75791 330 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 ITGB3P05106 788 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 RAB6CQ53S08 254 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 CYB5D1Q6P9G0 228 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 ZCCHC9Q8N567 271 aaKnown RBP19.11■□□□□ 0.65
HPS3-202ENST00000460120 ALLCQ8N6M5 410 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 TCP11Q8WWU5 503 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 RAB6CQ9H0N0 254 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 SDCBP2Q9H190 292 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 XYLT2Q9H1B5 865 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 RNF19AQ9NV58 838 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 SNX3O60493 162 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 CST8O60676 142 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 CDH16O75309 829 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 UBOX5O94941 541 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 CDKN2BP42772 138 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 OTUD4Q01804 1114 aaKnown RBP19.11■□□□□ 0.65
HPS3-202ENST00000460120 MPZL3Q6UWV2 235 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 FUKQ8N0W3 1084 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 LRRN4Q8WUT4 740 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 RNPEPQ9H4A4 650 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP19.11■□□□□ 0.65
HPS3-202ENST00000460120 TPX2Q9ULW0 747 aaKnown RBP19.11■□□□□ 0.65
HPS3-202ENST00000460120 AGAP1Q9UPQ3 857 aa19.11■□□□□ 0.65
HPS3-202ENST00000460120 ABLIM1O14639 778 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 RASSF9O75901 435 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 MCL1Q07820 350 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 PKN2Q16513 984 aaKnown RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 SH3D19Q5HYK7 790 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 ANKRD22Q5VYY1 191 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 PNMA8AQ86V59 439 aaPredicted RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 ARFGAP1Q8N6T3 406 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 BBOF1Q8ND07 529 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 ACTL9Q8TC94 416 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 CALN1Q9BXU9 219 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 KDM4CQ9H3R0 1056 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 TCRBV5S1A1TA0A578 114 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 MAP3K6O95382 1288 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 ERBB2P04626 1255 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 TXNP10599 105 aaKnown RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 EDNRBP24530 442 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 MXD4Q14582 209 aaPredicted RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 CDO1Q16878 200 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 NOL9Q5SY16 702 aaKnown RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 SH3PXD2AQ5TCZ1 1133 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 CDT1Q9H211 546 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 RPF1Q9H9Y2 349 aaKnown RBP19.1■□□□□ 0.65
HPS3-202ENST00000460120 PNMA3Q9UL41 463 aa19.1■□□□□ 0.65
HPS3-202ENST00000460120 GPR25O00155 361 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 LRCH4O75427 683 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 VCPP55072 806 aaKnown RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 ZNF667Q5HYK9 610 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 JADE1Q6IE81 842 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 CEP57Q86XR8 500 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 KIF2BQ8N4N8 673 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 USP15Q9Y4E8 981 aaPredicted RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 SOCS7O14512 581 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 FOXN2P32314 431 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 PIGHQ14442 188 aaPredicted RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 CELF3Q5SZQ8 465 aaKnown RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 RFX6Q8HWS3 928 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 SIX4Q9UIU6 781 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 GINS2Q9Y248 185 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 LACTBL1A8MY62 500 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 M0QYV0 167 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 LSM8O95777 96 aaKnown RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 VTNP04004 478 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 GCAP28676 217 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 SSTR1P30872 391 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 LMNB2Q03252 620 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 STAT4Q14765 748 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 CDCA2Q69YH5 1023 aaPredicted RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 C1orf127Q8N9H9 656 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 KCTD6Q8NC69 237 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 CKAP2Q8WWK9 683 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 FAM167AQ96KS9 214 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 CFAP57Q96MR6 1250 aa19.09■□□□□ 0.65
HPS3-202ENST00000460120 KLF6Q99612 283 aaPredicted RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 C12orf65Q9H3J6 166 aaKnown RBP19.09■□□□□ 0.65
HPS3-202ENST00000460120 A0A1W2PPM1 405 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 CNMDO75829 334 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 CTCFP49711 727 aaPredicted RBP19.08■□□□□ 0.65
HPS3-202ENST00000460120 MMRN1Q13201 1228 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 DNAJC3Q13217 504 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 ITIH4Q14624 930 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 KCTD2Q14681 263 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 E2F5Q15329 346 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 PPP1R15BQ5SWA1 713 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 NPNTQ6UXI9 565 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 SULF1Q8IWU6 871 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 PARP9Q8IXQ6 854 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 FGD4Q96M96 766 aa19.08■□□□□ 0.65
HPS3-202ENST00000460120 CCDC134Q9H6E4 229 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms