RNA–Protein interactions for RNA: ENST00000459994.2

SDF4-204, Transcript of stromal cell derived factor 4, humanhuman

TSL 5

Gene SDF4, Length 604 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-204ENST00000459994 PARD3BQ8TEW8 1205 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 SENP8Q96LD8 212 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 TSPAN18Q96SJ8 248 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 ASB7Q9H672 318 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 WNT16Q9UBV4 365 aa16.74■□□□□ 0.27
SDF4-204ENST00000459994 AFF4Q9UHB7 1163 aaKnown RBP16.74■□□□□ 0.27
SDF4-204ENST00000459994 MRPS23Q9Y3D9 190 aaKnown RBP16.74■□□□□ 0.27
SDF4-204ENST00000459994 NCANO14594 1321 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 ZNF638Q14966 1978 aaKnown RBP16.73■□□□□ 0.27
SDF4-204ENST00000459994 SOAT2O75908 522 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 ATP1A3P13637 1013 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 PTPN2P17706 415 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 MTIF2P46199 727 aaKnown RBP16.73■□□□□ 0.27
SDF4-204ENST00000459994 CLCN5P51795 746 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 VAMP7P51809 220 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 CLDN10P78369 228 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 KRT31Q15323 416 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 HSP90AA4PQ58FG1 418 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 TPGS2Q68CL5 300 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 OR10T2Q8NGX3 314 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 PLEKHO2Q8TD55 490 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 NXPE3Q969Y0 559 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 RTP3Q9BQQ7 232 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 YIPF1Q9Y548 306 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 FANCMQ8IYD8 2048 aa16.73■□□□□ 0.27
SDF4-204ENST00000459994 GREB1Q4ZG55 1949 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 XPOTO43592 962 aaKnown RBP16.72■□□□□ 0.27
SDF4-204ENST00000459994 STX10O60499 249 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 LRRN2O75325 713 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 PRKCSHP14314 528 aaPredicted RBP16.72■□□□□ 0.27
SDF4-204ENST00000459994 FCARP24071 287 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 MAN2A1Q16706 1144 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 OVOS1Q6IE37 1185 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 RTL10Q7L3V2 364 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 APTXQ7Z2E3 356 aaKnown RBP16.72■□□□□ 0.27
SDF4-204ENST00000459994 NT5DC4Q86YG4 428 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 SLC35C1Q96A29 364 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 ZSWIM3Q96MP5 696 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 TUBGCP2Q9BSJ2 902 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 TBC1D17Q9HA65 648 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 PDE11AQ9HCR9 933 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 SLC2A4RGQ9NR83 387 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 DPP3Q9NY33 737 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 SLC27A5Q9Y2P5 690 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 DERAQ9Y315 318 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.72■□□□□ 0.27
SDF4-204ENST00000459994 ZFP37Q9Y6Q3 630 aaPredicted RBP16.72■□□□□ 0.27
SDF4-204ENST00000459994 PTPRDP23468 1912 aa16.72■□□□□ 0.27
SDF4-204ENST00000459994 MTMR11A4FU01 709 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 TULP1O00294 542 aaPredicted RBP16.71■□□□□ 0.27
SDF4-204ENST00000459994 TYMPP19971 482 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 GTF2H1P32780 548 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 COPB1P53618 953 aaKnown RBP16.71■□□□□ 0.27
SDF4-204ENST00000459994 AP3M2P53677 418 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 DUSP4Q13115 394 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 C1orf220Q5T0J3 134 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 TANGO2Q6ICL3 276 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 CREBRFQ8IUR6 639 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 WDR49Q8IV35 697 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 ATAD1Q8NBU5 361 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 CCDC127Q96BQ5 260 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 FNBP1Q96RU3 617 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 CGRRF1Q99675 332 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 PRRX2Q99811 253 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 LRRC3Q9BY71 257 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 FOXQ1Q9C009 403 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 AVENQ9NQS1 362 aaPredicted RBP16.71■□□□□ 0.27
SDF4-204ENST00000459994 ARHGEF3Q9NR81 526 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 C2CD2Q9Y426 696 aa16.71■□□□□ 0.27
SDF4-204ENST00000459994 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.71■□□□□ 0.27
SDF4-204ENST00000459994 CACNA1HO95180 2353 aa16.71■□□□□ 0.26
SDF4-204ENST00000459994 PTPRJQ12913 1337 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 ANAPC1Q9H1A4 1944 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 GOLGA6L3A6NEY3 463 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 LRRIQ3A6PVS8 624 aaPredicted RBP16.7■□□□□ 0.26
SDF4-204ENST00000459994 DCNP07585 359 aaKnown RBP16.7■□□□□ 0.26
SDF4-204ENST00000459994 TPM2P07951 284 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 GLULP15104 373 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 DLG4P78352 724 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 FANCCQ00597 558 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 GSE1Q14687 1217 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 LMBRD2Q68DH5 695 aaPredicted RBP16.7■□□□□ 0.26
SDF4-204ENST00000459994 TMC8Q8IU68 726 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 CXorf38Q8TB03 319 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 ATOH1Q92858 354 aaPredicted RBP16.7■□□□□ 0.26
SDF4-204ENST00000459994 ZNF334Q9HCZ1 680 aaPredicted RBP16.7■□□□□ 0.26
SDF4-204ENST00000459994 TAB2Q9NYJ8 693 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 CACNA1IQ9P0X4 2223 aa16.7■□□□□ 0.26
SDF4-204ENST00000459994 SHISA7A6NL88 538 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 STK25O00506 426 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 CYB561D2O14569 222 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 PMM2O15305 246 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 SERPINC1P01008 464 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 AFPP02771 609 aaKnown RBP16.69■□□□□ 0.26
SDF4-204ENST00000459994 CYP11A1P05108 521 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 TRIM49P0CI25 452 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 TRIM49CP0CI26 452 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 DLATP10515 647 aaKnown RBP16.69■□□□□ 0.26
SDF4-204ENST00000459994 ODC1P11926 461 aa16.69■□□□□ 0.26
SDF4-204ENST00000459994 MYL4P12829 197 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms