RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 CLDN10P78369 228 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 C1QBPQ07021 282 aaKnown RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ENPEPQ07075 957 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 CYP24A1Q07973 514 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 BFSP1Q12934 665 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF268Q14587 947 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 TEAD2Q15562 447 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 TAF12Q16514 161 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 MGAT5BQ3V5L5 792 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 FAM171BQ6P995 826 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 VSTM1Q6UX27 236 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 VITQ6UXI7 678 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 C4orf50Q6ZRC1 276 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 GAREM2Q75VX8 874 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 LRRTM3Q86VH5 581 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 CBWD2Q8IUF1 395 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ADGRF2Q8IZF7 708 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 TMEM130Q8N3G9 435 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 KIAA1958Q8N8K9 716 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 ZSWIM2Q8NEG5 633 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 NKD2Q969F2 451 aaPredicted RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 CCDC47Q96A33 483 aaKnown RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 CCDC34Q96HJ3 373 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 HPDLQ96IR7 371 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 SPATA32Q96LK8 384 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 TMEM209Q96SK2 561 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 PKMYT1Q99640 499 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 MTMR12Q9C0I1 747 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 SLITRK6Q9H5Y7 841 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 VRTNQ9H8Y1 702 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 KIF9Q9HAQ2 790 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 DDX43Q9NXZ2 648 aaKnown RBP10.74□□□□□ -0.69
HDLBP-228ENST00000459788 EHD2Q9NZN4 543 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 CDH9Q9ULB4 789 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 HPSEQ9Y251 543 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 SNX9Q9Y5X1 595 aa10.74□□□□□ -0.69
HDLBP-228ENST00000459788 PRR23AA6NEV1 266 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 FAM170BA6NMN3 283 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 HEPACAM2A8MVW5 462 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ARNTLO00327 626 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 DPYSL4O14531 572 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 MAPK13O15264 365 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 KLRC4O43908 158 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 GFRA3O60609 400 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 NOL4O94818 638 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 KRT19P08727 400 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 GABRR2P28476 465 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 GDI1P31150 447 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 CUL4BQ13620 913 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 PKP1Q13835 747 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 NFIL3Q16649 462 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 SOWAHAQ2M3V2 549 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 TPRG1Q6ZUI0 275 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ARID3BQ8IVW6 561 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 YAF2Q8IY57 180 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ZNF687Q8N1G0 1237 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 CELF5Q8N6W0 485 aaKnown RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 GLIS3Q8NEA6 775 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 FAM200AQ8TCP9 573 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 SYAP1Q96A49 352 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 PAGE5Q96GU1 130 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 SPATA17Q96L03 361 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ZSWIM3Q96MP5 696 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 SEPT5Q99719 369 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 MKNK1Q9BUB5 465 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ATXN3LQ9H3M9 355 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 IL21Q9HBE4 155 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 EXOC1Q9NV70 894 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 DMAC2Q9NW81 257 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 THG1LQ9NWX6 298 aaKnown RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 ABI2Q9NYB9 513 aaPredicted RBP10.73□□□□□ -0.69
HDLBP-228ENST00000459788 SPAG17Q6Q759 2223 aa10.73□□□□□ -0.69
HDLBP-228ENST00000459788 CFAP54Q96N23 3096 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 IKBKBO14920 756 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 F11P03951 625 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 PFKFB1P16118 471 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 HMGA1P17096 107 aaKnown RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 TNNI1P19237 187 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 PPP3CCP48454 512 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 PDE6CP51160 858 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 NLRP12P59046 1061 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 PPP2R5DQ14738 602 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 UBXN2BQ14CS0 331 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 GPR158Q5T848 1215 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 FOXD4L5Q5VV16 416 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 MON1AQ86VX9 555 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 RALGPS2Q86X27 583 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 SPATA2LQ8IUW3 424 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 SYNPOQ8N3V7 929 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 TTC9BQ8N6N2 239 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 OR5B17Q8NGF7 314 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 CSGALNACT1Q8TDX6 532 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 FOXD4L4Q8WXT5 416 aaPredicted RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 MRPS31Q92665 395 aaKnown RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 HPS3Q969F9 1004 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 PHOX2BQ99453 314 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 GTPBP4Q9BZE4 634 aaKnown RBP10.72□□□□□ -0.69
HDLBP-228ENST00000459788 FOXQ1Q9C009 403 aa10.72□□□□□ -0.69
HDLBP-228ENST00000459788 CHRDQ9H2X0 955 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms