RNA–Protein interactions for RNA: ENST00000459775.5

USP39-210, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 2,148 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-210ENST00000459775 ABHD14A-ACY1A0A1B0GW23 586 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 DGKIO75912 1065 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 MTA2O94776 668 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 FGBP02675 491 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 CYP3A5P20815 502 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 FECHP22830 423 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 ACAT1P24752 427 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 LRPAP1P30533 357 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TNNC1P63316 161 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 DSC1Q08554 894 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 MYO1EQ12965 1108 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 PLEKHG6Q3KR16 790 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 WSCD1Q658N2 575 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 OSTM1Q86WC4 334 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 NPAS4Q8IUM7 802 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 GLYCTKQ8IVS8 523 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 RPUSD2Q8IZ73 545 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 RBBP8NLQ8NC74 664 aaPredicted RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 SVIPQ8NHG7 77 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 BCL7CQ8WUZ0 217 aaPredicted RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 KBTBD7Q8WVZ9 684 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TFAP2BQ92481 460 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 TOP1MTQ969P6 601 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 GAS2L1Q99501 681 aaPredicted RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP10.99□□□□□ -0.65
USP39-210ENST00000459775 ELOVL4Q9GZR5 314 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 DPEP3Q9H4B8 488 aa10.99□□□□□ -0.65
USP39-210ENST00000459775 ELAC1Q9H777 363 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 ZNHIT6Q9NWK9 470 aaKnown RBP10.99□□□□□ -0.65
USP39-210ENST00000459775 A0A087X0T9 212 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 TMCO5BA8MYB1 307 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CYB561D2O14569 222 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 INPPL1O15357 1258 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 XPOTO43592 962 aaKnown RBP10.98□□□□□ -0.65
USP39-210ENST00000459775 SERPING1P05155 500 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 MMEP08473 750 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 FAM228BP0C875 321 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CHRNB2P17787 502 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 SLC11A1P49279 550 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CLK1P49759 484 aaKnown RBP10.98□□□□□ -0.65
USP39-210ENST00000459775 TAF6P49848 677 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 ZNF132P52740 706 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 NDST1P52848 882 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CYP26C1Q6V0L0 522 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 LRRC52Q8N7C0 313 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 C12orf29Q8N999 325 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 LNX1Q8TBB1 728 aaPredicted RBP10.98□□□□□ -0.65
USP39-210ENST00000459775 URGCPQ8TCY9 931 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 PCDHB18PQ96TA0 734 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 TAS2R14Q9NYV8 317 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CHD7Q9P2D1 2997 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 THEGQ9P2T0 379 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 TTC3P53804 2025 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CDH23Q9H251 3354 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 CHD9Q3L8U1 2897 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 RALGAPA2Q2PPJ7 1873 aa10.98□□□□□ -0.65
USP39-210ENST00000459775 TRIM64CA6NLI5 447 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 DDX3XO00571 662 aaKnown RBP eCLIP10.97□□□□□ -0.659e-13■■■■□ 21.9
USP39-210ENST00000459775 NRP1O14786 923 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 ATP2C2O75185 946 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 CYP11B1P15538 503 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 GTF2A1P52655 376 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 ASTE1Q2TB18 679 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 ACOT1Q86TX2 421 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 TMTC1Q8IUR5 882 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 PASD1Q8IV76 773 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 PDCL2Q8N4E4 241 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 EPS8L1Q8TE68 723 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 SYN2Q92777 582 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 ZBTB9Q96C00 473 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 SENP8Q96LD8 212 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 FAM193BQ96PV7 902 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 C1QTNF1Q9BXJ1 281 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 VRTNQ9H8Y1 702 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 SEPT11Q9NVA2 429 aaKnown RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 NOCTQ9UK39 431 aaKnown RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 ZKSCAN5Q9Y2L8 839 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 COL6A3P12111 3177 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 RCCD1A6NED2 376 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 GRXCR1A8MXD5 290 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 AMHP03971 560 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 FERP16591 822 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 TBXAS1P24557 533 aaPredicted RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 KIF11P52732 1056 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 RAD23BP54727 409 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 PPIGQ13427 754 aaKnown RBP eCLIP10.97□□□□□ -0.654e-7■■□□□ 13.9
USP39-210ENST00000459775 C2CD6Q53TS8 623 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 KIAA0319Q5VV43 1072 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 TAS1R1Q7RTX1 841 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 OR6B3Q8NGW1 331 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 DDX1Q92499 740 aaKnown RBP10.97□□□□□ -0.65
USP39-210ENST00000459775 TAF4BQ92750 862 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 IQCDQ96DY2 449 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 CCDC42Q96M95 316 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 SYT11Q9BT88 431 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 PACSIN1Q9BY11 444 aa10.97□□□□□ -0.65
USP39-210ENST00000459775 TRIM10Q9UDY6 481 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms