RNA–Protein interactions for RNA: ENST00000458059.7

CNEP1R1-203, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,965 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-203ENST00000458059 ABL2P42684 1182 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 PHF13Q86YI8 300 aaPredicted RBP20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 FAM71DQ8N9W8 422 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 C10orf82Q8WW14 230 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 HSPH1Q92598 858 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 TTC17Q96AE7 1141 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 PAFAH2Q99487 392 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 IMPG2Q9BZV3 1241 aa20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 METTL5Q9NRN9 209 aaKnown RBP20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 PSMC3IPQ9P2W1 217 aaPredicted RBP20.59■□□□□ 0.89
CNEP1R1-203ENST00000458059 PSMA2P25787 234 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 CPA2P48052 419 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 TFDP3Q5H9I0 405 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 ZC3H18Q86VM9 953 aaKnown RBP20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 PALM2Q8IXS6 379 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 GRAMD1AQ96CP6 724 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 GMLQ99445 158 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 ATP2A1O14983 1001 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 PEX11AO75192 247 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 AVILO75366 819 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 SRGAP2CP0DJJ0 459 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 MARK3P27448 753 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 IL1R2P27930 398 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 HSPA1LP34931 641 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 MDH1BQ5I0G3 518 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 FAXDC2Q96IV6 333 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 CALN1Q9BXU9 219 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 KIAA1217Q5T5P2 1943 aa20.58■□□□□ 0.89
CNEP1R1-203ENST00000458059 ATP4AP20648 1035 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 GCKP35557 465 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 PCK1P35558 622 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 HMGCS2P54868 508 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 PRKG1Q13976 671 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 SMAD1Q15797 465 aaKnown RBP20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 RSAD2Q8WXG1 361 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 ZBTB10Q96DT7 871 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 WDR83Q9BRX9 315 aaKnown RBP20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 DEFB129Q9H1M3 183 aa20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 DENND2DQ9H6A0 471 aaPredicted RBP20.58■□□□□ 0.88
CNEP1R1-203ENST00000458059 KRT19P08727 400 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 YARSP54577 528 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 C1QBPQ07021 282 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 APBB1IPQ7Z5R6 666 aaPredicted RBP20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 UNC45BQ8IWX7 931 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 ACTL7BQ9Y614 415 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 TMEM63AO94886 807 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 CDKN2BP42772 138 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 LMNB2Q03252 620 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 ZBTB16Q05516 673 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 ACVR2BQ13705 512 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 OASLQ15646 514 aaKnown RBP20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 FAXCQ5TGI0 409 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 NPNTQ6UXI9 565 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 PAXIP1Q6ZW49 1069 aaPredicted RBP20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 THNSL1Q8IYQ7 743 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 DTX3LQ8TDB6 740 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 CPT1BQ92523 772 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 YIPF3Q9GZM5 350 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 LRMDAQ9H2I8 198 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 CISHQ9NSE2 258 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 RABGEF1Q9UJ41 708 aa20.57■□□□□ 0.88
CNEP1R1-203ENST00000458059 TYROBPO43914 113 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 FAM155BO75949 473 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 ABHD2P08910 425 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 CDH8P55286 799 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 GEMIN4P57678 1058 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 TTC7BQ86TV6 843 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 CCDC33Q8N5R6 958 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 SYNCQ9H7C4 482 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 ALOX15BO15296 676 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 NR1H3Q13133 447 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 MORF4L2Q15014 288 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 RAB6CQ53S08 254 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 NAIF1Q69YI7 327 aaPredicted RBP20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 DENND1BQ6P3S1 775 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 IGDCC3Q8IVU1 814 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 KIAA0319LQ8IZA0 1049 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 WDTC1Q8N5D0 677 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 NAF1Q96HR8 494 aaKnown RBP20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 TTC25Q96NG3 672 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 RAB6CQ9H0N0 254 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 PDLIM7Q9NR12 457 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 ARMCX1Q9P291 453 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 HEY2Q9UBP5 337 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 POLIQ9UNA4 740 aa20.56■□□□□ 0.88
CNEP1R1-203ENST00000458059 ENO4A6NNW6 628 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 TRIM72Q6ZMU5 477 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 RFX6Q8HWS3 928 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 FAM111AQ96PZ2 611 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 RNPEPL1Q9HAU8 725 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 SMG5Q9UPR3 1016 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 PRPF4O43172 522 aaKnown RBP eCLIP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 DCTN3O75935 186 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 RPL22P35268 128 aaKnown RBP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 CCNHP51946 323 aaPredicted RBP20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 MMRN1Q13201 1228 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 TMEM132AQ24JP5 1023 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 FYB2Q5VWT5 728 aa20.55■□□□□ 0.88
CNEP1R1-203ENST00000458059 SAMD7Q7Z3H4 446 aa20.55■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms