RNA–Protein interactions for RNA: ENST00000458046.6

SYNE2-207, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best)

Gene SYNE2, Length 2,669 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-207ENST00000458046 RAD17O75943 681 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 KRT10P13645 584 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 YWHABP31946 246 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 COILP38432 576 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 QARSP47897 775 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CDR1P51861 262 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 FMO1Q01740 532 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SNX1Q13596 522 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 UGCGQ16739 394 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 RNF180Q86T96 592 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 FAM71AQ8IYT1 594 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CHAC2Q8WUX2 184 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF653Q96CK0 615 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 ADAM7Q9H2U9 754 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CNOT10Q9H9A5 744 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SLC40A1Q9NP59 571 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 TOPORSQ9NS56 1045 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SCHIP1Q9P0W5 487 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF70Q9UC06 446 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 BLOC1S6Q9UL45 172 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 PCDHA3Q9Y5H8 950 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 C5orf60A6NFR6 353 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 GZMAP12544 262 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 CLUL1Q15846 466 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SPDYCQ5MJ68 293 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 PLA2G4FQ68DD2 849 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 STRA8Q7Z7C7 330 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 SLC13A5Q86YT5 568 aaPredicted RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 ZNF454Q8N9F8 522 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 C1orf54Q8WWF1 131 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 WNT8AQ9H1J5 351 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 KLC4Q9NSK0 619 aa12.45□□□□□ -0.42
SYNE2-207ENST00000458046 MTRF1LQ9UGC7 380 aaKnown RBP12.45□□□□□ -0.42
SYNE2-207ENST00000458046 MYH11P35749 1972 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 P4HA2O15460 535 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 CLDN3O15551 220 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 TNFRSF21O75509 655 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 FDX1P10109 184 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 DLATP10515 647 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 ADSSP30520 456 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 IFNAR2P48551 515 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 DGKZQ13574 1117 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 TNIP1Q15025 636 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PLCB4Q15147 1175 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 SNRNP35Q16560 246 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 ANKRD20A8PQ5CZ79 823 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 C3orf20Q8ND61 904 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 FAM151AQ8WW52 585 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 CD101Q93033 1021 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PGM2Q96G03 612 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PRMT1Q99873 361 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 CFHR5Q9BXR6 569 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 FAM129AQ9BZQ8 928 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 RRN3Q9NYV6 651 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 MTUS1Q9ULD2 1270 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PHTF1Q9UMS5 762 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 SBF1O95248 1867 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 DKK1O94907 266 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 ALAS1P13196 640 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 CYP11B1P15538 503 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 EIF2AK2P19525 551 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 HOXD12P35452 270 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 MMP13P45452 471 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 SMTNP53814 917 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 MFAP3P55082 362 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 SOX10P56693 466 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 MRPS9P82933 396 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 GTF2BQ00403 316 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 DLGAP5Q15398 846 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PPP1R7Q15435 360 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 TM4SF20Q53R12 229 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 FAM160B2Q86V87 743 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 DCLK2Q8N568 766 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 AGO4Q9HCK5 861 aaKnown RBP12.44□□□□□ -0.42
SYNE2-207ENST00000458046 FEM1BQ9UK73 627 aa12.44□□□□□ -0.42
SYNE2-207ENST00000458046 PASKQ96RG2 1323 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 ZBTB24O43167 697 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 RIPK2O43353 540 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 PLOD3O60568 738 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 ATP9AO75110 1047 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 PYGLP06737 847 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 MYCLP12524 364 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 TGFB2P61812 414 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 C2CD6Q53TS8 623 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 SLC45A4Q5BKX6 768 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 XKR9Q5GH70 373 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 RNF207Q6ZRF8 634 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 LRRC34Q8IZ02 419 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 TAS1R2Q8TE23 839 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 INTS9Q9NV88 658 aaKnown RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 DNAJC17Q9NVM6 304 aaKnown RBP12.43□□□□□ -0.42
SYNE2-207ENST00000458046 HAUS2Q9NVX0 235 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 RASSF9O75901 435 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 CSPG5O95196 566 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 KRT5P13647 590 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 SCTRP47872 440 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 HSD17B4P51659 736 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 RWDD2BP57060 319 aa12.43□□□□□ -0.42
SYNE2-207ENST00000458046 SIX1Q15475 284 aaPredicted RBP12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms