RNA–Protein interactions for RNA: ENST00000457461.1

CUBNP3-201, Transcript of cubilin pseudogene 3, humanhuman

BASIC

Gene CUBNP3, Length 1,784 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBNP3-201ENST00000457461 ZNF333Q96JL9 665 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ATP6V1G3Q96LB4 118 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TMEM237Q96Q45 408 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CIB1Q99828 191 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 NUDT12Q9BQG2 462 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MXRA8Q9BRK3 442 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PDCD2LQ9BRP1 358 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CCDC113Q9H0I3 377 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TRPV6Q9H1D0 765 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ASCC2Q9H1I8 757 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ACAD9Q9H845 621 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 RRAGCQ9HB90 399 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PXMP2Q9NR77 195 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 STOML1Q9UBI4 398 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 VANGL2Q9ULK5 521 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 IFT52Q9Y366 437 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TRIM17Q9Y577 477 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MCM3APO60318 1980 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PLXNB2O15031 1838 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MYH11P35749 1972 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 A0A1W2PRQ8 180 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 B8ZZF3 427 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 IGF2BP3O00425 579 aaKnown RBP eCLIP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 RGS13O14921 159 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 KLRC4O43908 158 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ITGBL1O95965 494 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PAHP00439 452 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ITGB5P18084 799 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 FECHP22830 423 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ANXA13P27216 316 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 AFMP43652 599 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 HERVK_113P62684 666 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PPP2R2AP63151 447 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 RELQ04864 619 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 FMR1Q06787 632 aaKnown RBP eCLIP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 DHX9Q08211 1270 aaKnown RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SNAPC2Q13487 334 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TTLL12Q14166 644 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PGM5Q15124 567 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ECM1Q16610 540 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MOGQ16653 247 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TTMPQ5BVD1 217 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 HERC4Q5GLZ8 1057 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SPDYAQ5MJ70 313 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ZBTB41Q5SVQ8 909 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MAP3K21Q5TCX8 1036 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 KRT79Q5XKE5 535 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 BORAQ6PGQ7 559 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 B3GNT6Q6ZMB0 384 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 GADL1Q6ZQY3 521 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MARK2Q7KZI7 788 aaKnown RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ASRGL1Q7L266 308 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 NET1Q7Z628 596 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TREML1Q86YW5 311 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 IFT20Q8IY31 132 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MMGT1Q8N4V1 131 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 PAF1Q8N7H5 531 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SNX29Q8TEQ0 813 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 AFG1LQ8WV93 481 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 OSCP1Q8WVF1 389 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 GJA10Q969M2 543 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CALML4Q96GE6 196 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 COX4I2Q96KJ9 171 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 RPRD1AQ96P16 312 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TAAR1Q96RJ0 339 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 C7orf25Q9BPX7 421 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 TRIM9Q9C026 710 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CEP44Q9C0F1 390 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 NT5C3AQ9H0P0 336 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CCDC134Q9H6E4 229 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CAAP1Q9H8G2 361 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 BRD9Q9H8M2 597 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SCPEP1Q9HB40 452 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 GBA2Q9HCG7 927 aaPredicted RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 HOMER2Q9NSB8 354 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 ABCF3Q9NUQ8 709 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 CYP39A1Q9NYL5 469 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 THEGQ9P2T0 379 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 EPS15L1Q9UBC2 864 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 KLHL3Q9UH77 587 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SFMBT1Q9UHJ3 866 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 POLG2Q9UHN1 485 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 SLC12A6Q9UHW9 1150 aa7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 APOBEC2Q9Y235 224 aaKnown RBP7.18□□□□□ -1.26
CUBNP3-201ENST00000457461 MYH9P35579 1960 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ARID2Q68CP9 1835 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ZNF236Q9UL36 1845 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 hCG_2014768A0A024R1R8 64 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 SIGLEC16A6NMB1 481 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ENPP3O14638 875 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 AREL1O15033 823 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 DHX15O43143 795 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 HOXA2O43364 376 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ZNF862O60290 1169 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ADAMTS4O75173 837 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 CNOT3O75175 753 aaKnown RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RHOBTB3O94955 611 aa7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 ABCB1P08183 1280 aaPredicted RBP7.17□□□□□ -1.26
CUBNP3-201ENST00000457461 RHOXF2BP0C7M4 288 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms