RNA–Protein interactions for RNA: ENST00000457039.6

SMPD4-215, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 5

Gene SMPD4, Length 940 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-215ENST00000457039 NFE2Q16621 373 aaPredicted RBP15.08■□□□□ 0
SMPD4-215ENST00000457039 EXOC3L4Q17RC7 722 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 LIN9Q5TKA1 542 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 PHLDB3Q6NSJ2 640 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 TRIM65Q6PJ69 517 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 GBP6Q6ZN66 633 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 CCDC149Q6ZUS6 474 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 LUZP1Q86V48 1076 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 ARHGEF19Q8IW93 802 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 FAM200AQ8TCP9 573 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 SPPL2BQ8TCT7 592 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 SUSD6Q92537 303 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 TWNKQ96RR1 684 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 ADAM7Q9H2U9 754 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 CYP4F11Q9HBI6 524 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 INSL5Q9Y5Q6 135 aa15.08■□□□□ 0
SMPD4-215ENST00000457039 GRXCR2A6NFK2 248 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 BECN2A8MW95 431 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 MBTPS2O43462 519 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 HNRNPA1P09651 372 aaKnown RBP eCLIP15.07■□□□□ 0
SMPD4-215ENST00000457039 PTPN1P18031 435 aaKnown RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 CD58P19256 250 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 ACO1P21399 889 aaKnown RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 TBXAS1P24557 533 aaPredicted RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 PON1P27169 355 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 ELF1P32519 619 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 COPB1P53618 953 aaKnown RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 ITIH3Q06033 890 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 KCNMA1Q12791 1236 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 SMAD4Q13485 552 aaKnown RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 CFAP221Q4G0U5 840 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 PPM1LQ5SGD2 360 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 RARS2Q5T160 578 aaKnown RBP15.07■□□□□ 0
SMPD4-215ENST00000457039 TMC5Q6UXY8 1006 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 GPR149Q86SP6 731 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 CRYBG2Q8N1P7 616 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 TTC39CQ8N584 583 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 TTC9BQ8N6N2 239 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 B3GALNT2Q8NCR0 500 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 MYCBPAPQ8TBZ2 947 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 KAT5Q92993 513 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 MYLPFQ96A32 169 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 LPIN3Q9BQK8 851 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 APOL5Q9BWW9 433 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 PRKD2Q9BZL6 878 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 ELOVL4Q9GZR5 314 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 VPS16Q9H269 839 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 ABCB6Q9NP58 842 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 SIX2Q9NPC8 291 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 CISHQ9NSE2 258 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 SLC27A5Q9Y2P5 690 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 YIPF1Q9Y548 306 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 PCDHB5Q9Y5E4 795 aa15.07■□□□□ 0
SMPD4-215ENST00000457039 CCDC195A0A1B0GUA6 201 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 PRRG1O14668 218 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 HAPLN1P10915 354 aaPredicted RBP15.06■□□□□ 0
SMPD4-215ENST00000457039 CDK11BP21127 795 aaKnown RBP15.06■□□□□ 0
SMPD4-215ENST00000457039 CDR1P51861 262 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 APBA1Q02410 837 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 MAPRE1Q15691 268 aaKnown RBP15.06■□□□□ 0
SMPD4-215ENST00000457039 MDH1BQ5I0G3 518 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 CYP26C1Q6V0L0 522 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 PPM1KQ8N3J5 372 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 ANKRD20A12PQ8NF67 263 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 ATXN2LQ8WWM7 1075 aaKnown RBP15.06■□□□□ 0
SMPD4-215ENST00000457039 PCED1BQ96HM7 432 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 FUBP3Q96I24 572 aaKnown RBP eCLIP15.06■□□□□ 0
SMPD4-215ENST00000457039 TNIP3Q96KP6 325 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 KREMEN1Q96MU8 473 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 TSPY26PQ9H489 355 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 ABI2Q9NYB9 513 aaPredicted RBP15.06■□□□□ 0
SMPD4-215ENST00000457039 CDH22Q9UJ99 828 aa15.06■□□□□ 0
SMPD4-215ENST00000457039 LGALS16A8MUM7 142 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 RAD23BP54727 409 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 TWF1Q12792 350 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 ORC1Q13415 861 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 AAK1Q2M2I8 961 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 PUS10Q3MIT2 529 aaKnown RBP15.05■□□□□ -0
SMPD4-215ENST00000457039 PTCRAQ6ISU1 281 aaPredicted RBP15.05■□□□□ -0
SMPD4-215ENST00000457039 C4orf50Q6ZRC1 276 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 RRAGAQ7L523 313 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 ACOT1Q86TX2 421 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 SLC4A11Q8NBS3 891 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 NT5C1AQ9BXI3 368 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 B3GNT5Q9BYG0 378 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 APEX2Q9UBZ4 518 aa15.05■□□□□ -0
SMPD4-215ENST00000457039 USP15Q9Y4E8 981 aaPredicted RBP15.05■□□□□ -0
SMPD4-215ENST00000457039 PTPRDP23468 1912 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 SPDYE4A6NLX3 237 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 CCL16O15467 120 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 SOAT2O75908 522 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 TPM2P07951 284 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 ATF6P18850 670 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 CYP2F1P24903 491 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 MAGEA11P43364 429 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 TUFMP49411 452 aaKnown RBP15.04■□□□□ -0
SMPD4-215ENST00000457039 KCNQ1P51787 676 aa15.04■□□□□ -0
SMPD4-215ENST00000457039 YWHAEP62258 255 aaKnown RBP15.04■□□□□ -0
SMPD4-215ENST00000457039 MRPS5P82675 430 aaKnown RBP15.04■□□□□ -0
SMPD4-215ENST00000457039 SMAD2Q15796 467 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms