RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	CCNE2	O96020	404 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	MMP3	P08254	477 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	MYL3	P08590	195 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	PAM	P19021	973 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CYP3A7	P24462	503 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ICAM3	P32942	547 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	TEC	P42680	631 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	NASP	P49321	788 aa	Predicted RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ACTR2	P61160	394 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ARHGAP1	Q07960	439 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	NEDD9	Q14511	834 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ICAM4	Q14773	271 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	PTPA	Q15257	358 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CDSN	Q15517	529 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	FSCN1	Q16658	493 aa	Known RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	UGCG	Q16739	394 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	HSDL1	Q3SXM5	330 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	DUSP28	Q4G0W2	176 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	SPECC1	Q5M775	1068 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CELF3	Q5SZQ8	465 aa	Known RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CCDC62	Q6P9F0	684 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	KCNV1	Q6PIU1	500 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	METTL7B	Q6UX53	244 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	MIER3	Q7Z3K6	550 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CCDC60	Q8IWA6	550 aa	Predicted RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	TAB3	Q8N5C8	712 aa	Predicted RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	LINC00301	Q8NCQ3	95 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	PPTC7	Q8NI37	304 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	KCNG4	Q8TDN1	519 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	LEO1	Q8WVC0	666 aa	Predicted RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	HAS1	Q92839	578 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	SLC5A5	Q92911	643 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	NKD1	Q969G9	470 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ARMC5	Q96C12	935 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CLIC6	Q96NY7	704 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	DEFB118	Q96PH6	123 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	GBP4	Q96PP9	640 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	YIPF4	Q9BSR8	244 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	RAB34	Q9BZG1	259 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	NOL6	Q9H6R4	1146 aa	Known RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	SPC25	Q9HBM1	224 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	PPP4R1L	Q9P1A2	415 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	DDX41	Q9UJV9	622 aa	Known RBP	5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	CFAP45	Q9UL16	551 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	SCN10A	Q9Y5Y9	1956 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	TANC1	Q9C0D5	1861 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	ALPK3	Q96L96	1907 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	IGSF9B	Q9UPX0	1349 aa		5.21	□□□□□ -1.58
COL21A1-204	ENST00000456983	KBTBD13	C9JR72	458 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	LAD1	O00515	517 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	TBX3	O15119	743 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	DUSP11	O75319	330 aa	Known RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PSMD10	O75832	226 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	LGALS2	P05162	132 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	SUPT20HL2	P0C7V6	817 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	TGFB3	P10600	412 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CDC25A	P30304	524 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	TCF7	P36402	384 aa	Predicted RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PRPH	P41219	470 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CPT1A	P50416	773 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	JAK3	P52333	1124 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	EPHB4	P54760	987 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	NKX3-2	P78367	333 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PRKCE	Q02156	737 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CLC	Q05315	142 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	SPIRE1	Q08AE8	756 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	ABHD18	Q0P651	414 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PPP2R5C	Q13362	524 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CTTN	Q14247	550 aa	Known RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	IL17A	Q16552	155 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	BRDT	Q58F21	947 aa	Predicted RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	HAUS3	Q68CZ6	603 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	IQSEC1	Q6DN90	963 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	MIS18BP1	Q6P0N0	1132 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	ZNF585A	Q6P3V2	769 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	ERMP1	Q7Z2K6	904 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	RNF180	Q86T96	592 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CKAP2L	Q8IYA6	745 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	ERMN	Q8TAM6	284 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	GLG1	Q92896	1179 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	DYDC2	Q96IM9	177 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CDK5RAP3	Q96JB5	506 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	FAM20A	Q96MK3	541 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CCDC43	Q96MW1	224 aa	Known RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	MTMR9	Q96QG7	549 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PLIN2	Q99541	437 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	RIT2	Q99578	217 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	TM9SF2	Q99805	663 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	LXN	Q9BS40	222 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	GBP3	Q9H0R5	595 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CSRNP2	Q9H175	543 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	AZI2	Q9H6S1	392 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	RXFP1	Q9HBX9	757 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	CD248	Q9HCU0	757 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	TBC1D22B	Q9NU19	505 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	RNF19A	Q9NV58	838 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	GABBR1	Q9UBS5	961 aa		5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	FBXO2	Q9UK22	296 aa	Predicted RBP	5.2	□□□□□ -1.58
COL21A1-204	ENST00000456983	PCDHA12	Q9UN75	941 aa		5.2	□□□□□ -1.58

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms