RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 LRRC63Q05C16 580 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 ZACNQ401N2 412 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 PRSS36Q5K4E3 855 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 TCERG1LQ5VWI1 586 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 PARM1Q6UWI2 310 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 SCN4BQ8IWT1 228 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 SUGP1Q8IWZ8 645 aaKnown RBP19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 KBTBD7Q8WVZ9 684 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 PSMG2Q969U7 264 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 GCNAQ96QF7 691 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 LPIN3Q9BQK8 851 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 GPR88Q9GZN0 384 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 MFSD1Q9H3U5 465 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 SMOC2Q9H3U7 446 aa19.33■□□□□ 0.68
PDLIM2-215ENST00000456545 MYBPHLA2RUH7 354 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ANHXE9PGG2 379 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 HCRTO43612 131 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ATP2C2O75185 946 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 HLA-DRAP01903 254 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 GJA1P17302 382 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 CCNE1P24864 410 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 CYP27A1Q02318 531 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ENPEPQ07075 957 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 HTR4Q13639 388 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ARHGAP15Q53QZ3 475 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 SCARA5Q6ZMJ2 495 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 HFE2Q6ZVN8 426 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 LIMS2Q7Z4I7 341 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 TAF4BQ92750 862 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 XYLT2Q9H1B5 865 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 DNAJC25Q9H1X3 360 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ATXN3LQ9H3M9 355 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 ABCB6Q9NP58 842 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 DUSP12Q9UNI6 340 aa19.32■□□□□ 0.68
PDLIM2-215ENST00000456545 DOCK8Q8NF50 2099 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 NOTCH4Q99466 2003 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 A0A1W2PRU2 124 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 BICDL2A1A5D9 508 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 TRIM49BA6NDI0 452 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 STK25O00506 426 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 VNN1O95497 513 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 TRIM21P19474 475 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 COL9A1P20849 921 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 RFX1P22670 979 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 CYP2F1P24903 491 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 GABRR2P28476 465 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 CCR2P41597 374 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 EPHA5P54756 1037 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 TEAD2Q15562 447 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 GPR152Q8TDT2 470 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 FGF14Q92915 247 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 IPO9Q96P70 1041 aaKnown RBP19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 GBP4Q96PP9 640 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 KXD1Q9BQD3 176 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 VRTNQ9H8Y1 702 aa19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 MAGED2Q9UNF1 606 aaPredicted RBP19.31■□□□□ 0.68
PDLIM2-215ENST00000456545 NARSO43776 548 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 CFHP08603 1231 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 CSH1P0DML2 217 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 CSH2P0DML3 217 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 SRFP11831 508 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 PTPN1P18031 435 aaKnown RBP19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 ATF6P18850 670 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 ANXA13P27216 316 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 GTF2H1P32780 548 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 GRIK1P39086 918 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 CDH8P55286 799 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 PPP3CAQ08209 521 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 MORC3Q14149 939 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 DDR2Q16832 855 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 DCAF17Q5H9S7 520 aaPredicted RBP19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 MDH1BQ5I0G3 518 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 C1orf220Q5T0J3 134 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 KRT39Q6A163 491 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 FAM171BQ6P995 826 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 BMP8AQ7Z5Y6 402 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 NELFBQ8WX92 580 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 MYLPFQ96A32 169 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 ELMO3Q96BJ8 720 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 FUBP3Q96I24 572 aaKnown RBP eCLIP19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 ZFP14Q9HCL3 533 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 TMEM8AQ9HCN3 771 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 ARMCX3Q9UH62 379 aaPredicted RBP19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 HCN4Q9Y3Q4 1203 aa19.3■□□□□ 0.68
PDLIM2-215ENST00000456545 SLC16A3O15427 465 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 BDNFP23560 247 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 CDC25CP30307 473 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 RAP1GAPP47736 663 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 GPR15P49685 360 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 PMS1P54277 932 aaKnown RBP19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 CFAP221Q4G0U5 840 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 CCDC40Q4G0X9 1142 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 SDHAF4Q5VUM1 108 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 TRIML1Q8N9V2 468 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 SHKBP1Q8TBC3 707 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 MYCBPAPQ8TBZ2 947 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 ASIC4Q96FT7 647 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 TNIP3Q96KP6 325 aa19.29■□□□□ 0.68
PDLIM2-215ENST00000456545 PKMYT1Q99640 499 aa19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms