RNA–Protein interactions for RNA: ENST00000456506.2

LMCD1-206, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2

Gene LMCD1, Length 1,059 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-206ENST00000456506 CCDC6Q16204 474 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 MGAT5BQ3V5L5 792 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 WSCD1Q658N2 575 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 MYCT1Q8N699 235 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 STKLD1Q8NE28 680 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 RAD54LQ92698 747 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 EBF3Q9H4W6 596 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 ZMYM5Q9UJ78 669 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 DSEQ9UL01 958 aa12.85□□□□□ -0.35
LMCD1-206ENST00000456506 SOBPA7XYQ1 873 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 RPP40O75818 363 aaKnown RBP12.84□□□□□ -0.35
LMCD1-206ENST00000456506 ARSAP15289 507 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 TAF6P49848 677 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 SHC2P98077 582 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 ZNF268Q14587 947 aaPredicted RBP12.84□□□□□ -0.35
LMCD1-206ENST00000456506 N4BP2L1Q5TBK1 243 aaPredicted RBP12.84□□□□□ -0.35
LMCD1-206ENST00000456506 TXNDC8Q6A555 127 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 CEP68Q76N32 757 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 CACNA2D4Q7Z3S7 1137 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 MON1AQ86VX9 555 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 MAB21L3Q8N8X9 362 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 ZSWIM2Q8NEG5 633 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 FAM212AQ96EL1 285 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 CDK5RAP3Q96JB5 506 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 PYM1Q9BRP8 204 aaKnown RBP12.84□□□□□ -0.35
LMCD1-206ENST00000456506 TDP1Q9NUW8 608 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 DPP3Q9NY33 737 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 CEP295Q9C0D2 2601 aa12.84□□□□□ -0.35
LMCD1-206ENST00000456506 PI4KAP42356 2102 aa12.83□□□□□ -0.35
LMCD1-206ENST00000456506 KPNA7A9QM74 516 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 RNF40O75150 1001 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 NOL4O94818 638 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 FAM13AO94988 1023 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 CD2BP2O95400 341 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 PLCG1P19174 1290 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 DDX6P26196 483 aaKnown RBP eCLIP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 GJA4P35212 333 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 GALK1P51570 392 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 SMARCB1Q12824 385 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 DHX8Q14562 1220 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 VEPH1Q14D04 833 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 KARSQ15046 597 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 CCDC142Q17RM4 750 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 C8orf34Q49A92 452 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 FAM200AQ8TCP9 573 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 LEO1Q8WVC0 666 aaPredicted RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 DDX1Q92499 740 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 TRMT2BQ96GJ1 504 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 MYRFLQ96LU7 910 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 SLC22A12Q96S37 553 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 DUSP15Q9H1R2 295 aaPredicted RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 SMOC1Q9H4F8 434 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 KIF9Q9HAQ2 790 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 THG1LQ9NWX6 298 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 ABI2Q9NYB9 513 aaPredicted RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 AGO2Q9UKV8 859 aaKnown RBP12.83□□□□□ -0.36
LMCD1-206ENST00000456506 PCDHGA5Q9Y5G8 931 aa12.83□□□□□ -0.36
LMCD1-206ENST00000456506 MYO18AQ92614 2054 aaKnown RBP12.82□□□□□ -0.36
LMCD1-206ENST00000456506 CHRM1P11229 460 aaPredicted RBP12.82□□□□□ -0.36
LMCD1-206ENST00000456506 KCNA1Q09470 495 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 USP4Q13107 963 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 ZNF77Q15935 545 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 PLK5Q496M5 336 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 STPG1Q5TH74 334 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 SDHAF4Q5VUM1 108 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 ADALQ6DHV7 355 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 MCTP1Q6DN14 999 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 ZNF720Q7Z2F6 126 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 THEM5Q8N1Q8 247 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 PDCL2Q8N4E4 241 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 CAMKK1Q8N5S9 505 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 FAM84AQ96KN4 292 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 GCNAQ96QF7 691 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 GCNT4Q9P109 453 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 L1RE1Q9UN81 338 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 PCDHB5Q9Y5E4 795 aa12.82□□□□□ -0.36
LMCD1-206ENST00000456506 MYH10P35580 1976 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 PCDH15Q96QU1 1955 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ANTXRLA6NF34 631 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 HCRTO43612 131 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ATG13O75143 517 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 GJB2P29033 226 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 ABCD1P33897 745 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 AVPR1AP37288 418 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 MPLP40238 635 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 UBA7P41226 1012 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 GRSF1Q12849 480 aaKnown RBP eCLIP12.81□□□□□ -0.36
LMCD1-206ENST00000456506 MTF1Q14872 753 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 PTPAQ15257 358 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 GAB4Q2WGN9 574 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 SV2CQ496J9 727 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 AASDHQ4L235 1098 aaPredicted RBP12.81□□□□□ -0.36
LMCD1-206ENST00000456506 SLFN12LQ6IEE8 588 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 TCEAL6Q6IPX3 200 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 USP49Q70CQ1 688 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 SYT13Q7L8C5 426 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 OSTM1Q86WC4 334 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 METTL23Q86XA0 190 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 NT5DC4Q86YG4 428 aa12.81□□□□□ -0.36
LMCD1-206ENST00000456506 C1orf127Q8N9H9 656 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms