RNA–Protein interactions for RNA: ENST00000453030.5

GARNL3-210, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 536 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-210ENST00000453030 TMLHEQ9NVH6 421 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 THG1LQ9NWX6 298 aaKnown RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 MAGED2Q9UNF1 606 aaPredicted RBP12.59□□□□□ -0.39
GARNL3-210ENST00000453030 STYXL1Q9Y6J8 313 aa12.59□□□□□ -0.39
GARNL3-210ENST00000453030 EXTL3O43909 919 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 LRP3O75074 770 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 PPP1R37O75864 691 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 IL18RAPO95256 599 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 GCNT3O95395 438 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 ITGB3P05106 788 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 PXNP49023 591 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-210ENST00000453030 NLRP12P59046 1061 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 CCDC142Q17RM4 750 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 ZNF720Q7Z2F6 126 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 TMEM150AQ86TG1 271 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 DCP1BQ8IZD4 617 aaKnown RBP12.58□□□□□ -0.4
GARNL3-210ENST00000453030 PDCL2Q8N4E4 241 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 FAM160A2Q8N612 972 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-210ENST00000453030 ZSWIM2Q8NEG5 633 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 RIN3Q8TB24 985 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 NETO1Q8TDF5 533 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 USP13Q92995 863 aaPredicted RBP12.58□□□□□ -0.4
GARNL3-210ENST00000453030 HVCN1Q96D96 273 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 UPF2Q9HAU5 1272 aaKnown RBP12.58□□□□□ -0.4
GARNL3-210ENST00000453030 HPS4Q9NQG7 708 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 GKN1Q9NS71 199 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 PCDHB5Q9Y5E4 795 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 CLIC4Q9Y696 253 aa12.58□□□□□ -0.4
GARNL3-210ENST00000453030 MYOFQ9NZM1 2061 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 MYMKA6NI61 221 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 GDF9O60383 454 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 PRPF40AO75400 957 aaKnown RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 ARSAP15289 507 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 HMGA1P17096 107 aaKnown RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 ACAT1P24752 427 aaKnown RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 WEE1P30291 646 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CNR2P34972 360 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CASP5P51878 434 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 SMARCB1Q12824 385 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 RUNX3Q13761 415 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CCDC6Q16204 474 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CSRP2Q16527 193 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 L1TD1Q5T7N2 865 aaKnown RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 TXNDC8Q6A555 127 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 WDR5BQ86VZ2 330 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 BRSK2Q8IWQ3 736 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 C1orf127Q8N9H9 656 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 MRPS31Q92665 395 aaKnown RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CHFRQ96EP1 664 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 TRPC7Q9HCX4 862 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 RBAKQ9NYW8 714 aaPredicted RBP12.57□□□□□ -0.4
GARNL3-210ENST00000453030 STK17AQ9UEE5 414 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 CCDC39Q9UFE4 941 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 L1RE1Q9UN81 338 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 AGAP1Q9UPQ3 857 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 THADAQ6YHU6 1953 aa12.57□□□□□ -0.4
GARNL3-210ENST00000453030 MYH10P35580 1976 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 USP24Q9UPU5 2620 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 GOLGA8IPA6NC78 632 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 OTOL1A6NHN0 477 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 GOLGA8JA6NMD2 632 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 SLC30A4O14863 429 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 HCRTO43612 131 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 RNF40O75150 1001 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 TADA3O75528 432 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 F11P03951 625 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 KRT19P08727 400 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 CSH1P0DML2 217 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 CSH2P0DML3 217 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 IDEP14735 1019 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 DDX6P26196 483 aaKnown RBP eCLIP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 TXLNAP40222 546 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 PNPLA4P41247 253 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 CEBPZQ03701 1054 aaKnown RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 GRSF1Q12849 480 aaKnown RBP eCLIP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 POSTNQ15063 836 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 PTPAQ15257 358 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 NFE2Q16621 373 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 DDR2Q16832 855 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 PPM1JQ5JR12 505 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 RRAGBQ5VZM2 374 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 NAIF1Q69YI7 327 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 SCARA3Q6AZY7 606 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 FSTL4Q6MZW2 842 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 NT5DC4Q86YG4 428 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 SYNPOQ8N3V7 929 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 CLIC6Q96NY7 704 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 ACCSQ96QU6 501 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 FAM83CQ9BQN1 747 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 FGFBP2Q9BYJ0 223 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 MTMR12Q9C0I1 747 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 KIF9Q9HAQ2 790 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 TDP1Q9NUW8 608 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 POLR3BQ9NW08 1133 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 DDX43Q9NXZ2 648 aaKnown RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 SEL1LQ9UBV2 794 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 ZMYM5Q9UJ78 669 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 FBXO2Q9UK22 296 aaPredicted RBP12.56□□□□□ -0.4
GARNL3-210ENST00000453030 EXOC7Q9UPT5 735 aa12.56□□□□□ -0.4
GARNL3-210ENST00000453030 ABCA7Q8IZY2 2146 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms