RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MYL7Q01449 175 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TRAF3Q13114 568 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CAMK1Q14012 370 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TRIM25Q14258 630 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 CAPRIN1Q14444 709 aaKnown RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 MORF4L2Q15014 288 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ABCB5Q2M3G0 1257 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TJAP1Q5JTD0 557 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CFAP70Q5T0N1 1121 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ARMC4Q5T2S8 1044 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 IL23RQ5VWK5 629 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 EGFLAMQ63HQ2 1017 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM173BQ6P4H8 233 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BORAQ6PGQ7 559 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ABRAXAS1Q6UWZ7 409 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 BARGINQ6ZT62 677 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 PDZD4Q76G19 769 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 JAMLQ86YT9 394 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ZNF786Q8N393 782 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 LEMD2Q8NC56 503 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TMCO6Q96DC7 493 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 OXNAD1Q96HP4 312 aaPredicted RBP2.3□□□□□ -2.04
USP53-202ENST00000450251 FAM118BQ9BPY3 351 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TEX12Q9BXU0 123 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SMARCAD1Q9H4L7 1026 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 JMJD4Q9H9V9 463 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 SAYSD1Q9NPB0 183 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CYP26B1Q9NR63 512 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 ENOPH1Q9UHY7 261 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 VANGL2Q9ULK5 521 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TMCC3Q9ULS5 477 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 TMEM5Q9Y2B1 443 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 USP20Q9Y2K6 914 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NR2E3Q9Y5X4 410 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 CAPN6Q9Y6Q1 641 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NFAT5O94916 1531 aa2.3□□□□□ -2.04
USP53-202ENST00000450251 NEDD4P46934 1319 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MYPNQ86TC9 1320 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TMEM221A6NGB7 291 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZBBXA8MT70 800 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CLDN25C9JDP6 229 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NOP56O00567 594 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 DAPK3O43293 454 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NDUFB5O43674 189 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 CSDE1O75534 798 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 MFN2O95140 757 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 EPN2O95208 641 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TGDSO95455 350 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ACSL3O95573 720 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RALBP11234 206 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PLCG2P16885 1265 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NPR3P17342 541 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MSH3P20585 1137 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RPL22P35268 128 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 RGS7P49802 495 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KPNA1P52294 538 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 EPHB1P54762 984 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 DRG2P55039 364 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 RTP1P59025 263 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MCCD1P59942 119 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 HAND2P61296 217 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TAGLNQ01995 201 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 KRT17Q04695 432 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PUDPQ08623 228 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 KCNMA1Q12791 1236 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ITGADQ13349 1161 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TP53BP2Q13625 1128 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PLCL1Q15111 1095 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RASA2Q15283 850 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C2CD6Q53TS8 623 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SPANXN2Q5MJ10 180 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NT5DC1Q5TFE4 455 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 MEI1Q5TIA1 1274 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ANO7Q6IWH7 933 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF530Q6P9A1 599 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 LVRNQ6Q4G3 990 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF767PQ75MW2 155 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 NOP9Q86U38 636 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 ZNF598Q86UK7 904 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 TXNDC2Q86VQ3 553 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GATAD2AQ86YP4 633 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 SLFN12Q8IYM2 578 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PACRGLQ8N7B6 248 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 GOLM1Q8NBJ4 401 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 OR7G1Q8NGA0 311 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 RAB2BQ8WUD1 216 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PGBD4Q96DM1 585 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TMEM79Q9BSE2 394 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TSEN34Q9BSV6 310 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 CDK19Q9BWU1 502 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TMEM120AQ9BXJ8 343 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 TMEM121BQ9BXQ6 578 aaPredicted RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 AP1M1Q9BXS5 423 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 STK33Q9BYT3 514 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 INTS2Q9H0H0 1204 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 SERHL2Q9H4I8 314 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 C14orf93Q9H972 538 aaKnown RBP2.29□□□□□ -2.04
USP53-202ENST00000450251 MLXIPQ9HAP2 919 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 VTA1Q9NP79 307 aa2.29□□□□□ -2.04
USP53-202ENST00000450251 PANK4Q9NVE7 773 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms