RNA–Protein interactions for RNA: ENST00000446987.5

DDX56-206, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-206ENST00000446987 AP1B1Q10567 949 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 GPNMBQ14956 572 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TARBP2Q15633 366 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 BAP1Q92560 729 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 CNOT6LQ96LI5 555 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 EIF2AK1Q9BQI3 630 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 LXNQ9BS40 222 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 PPP1R12CQ9BZL4 782 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 BLZF1Q9H2G9 400 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 MAGEF1Q9HAY2 307 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 NLRC4Q9NPP4 1024 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TMEM98Q9Y2Y6 226 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TMED5Q9Y3A6 229 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 NR2E3Q9Y5X4 410 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 TRIM49BA6NDI0 452 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 EIF4E1BA6NMX2 242 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 PP2D1A8MPX8 630 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 DAPK3O43293 454 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 HBP1O60381 514 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 GM2AP17900 193 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 CYP2C18P33260 490 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 CD97P48960 835 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 CYP4A11Q02928 519 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 PTK7Q13308 1070 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 ADRM1Q16186 407 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 ARL6IP4Q66PJ3 421 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 ANO5Q75V66 913 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 ATP6V0A1Q93050 837 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 GDF15Q99988 308 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 DDX23Q9BUQ8 820 aaKnown RBP13.8□□□□□ -0.2
DDX56-206ENST00000446987 HIPK3Q9H422 1215 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 FGFR1OP2Q9NVK5 253 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 ZNF212Q9UDV6 495 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 LNPEPQ9UIQ6 1025 aa13.8□□□□□ -0.2
DDX56-206ENST00000446987 LAD1O00515 517 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 ZBTB39O15060 712 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 BUB1O43683 1085 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 MED24O75448 989 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 SLITRK3O94933 977 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 C22orf31O95567 290 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 TIMP1P01033 207 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 SERPING1P05155 500 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 P4HBP07237 508 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 LONP1P36776 959 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 MTIF2P46199 727 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 QARSP47897 775 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 PMS1P54277 932 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 PSMC5P62195 406 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 IGBP1P78318 339 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 POU5F1Q01860 360 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 CTTNQ14247 550 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 ECM1Q16610 540 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 SNX30Q5VWJ9 437 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 HGSNATQ68CP4 663 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 FOXR2Q6PJQ5 311 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 NCCRP1Q6ZVX7 275 aaPredicted RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 INTS8Q75QN2 995 aaKnown RBP13.79□□□□□ -0.2
DDX56-206ENST00000446987 DDX42Q86XP3 938 aaKnown RBP eCLIP13.79□□□□□ -0.2
DDX56-206ENST00000446987 LINC01465Q8N7H1 131 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 WDR60Q8WVS4 1066 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 BADQ92934 168 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 P2RX5Q93086 422 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 SH2D3AQ9BRG2 576 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 ZDHHC18Q9NUE0 388 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 INTUQ9ULD6 942 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 MAPK8IP1Q9UQF2 711 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 COL1A2P08123 1366 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 PTPRSQ13332 1948 aa13.79□□□□□ -0.2
DDX56-206ENST00000446987 TCP11X1B4DZS4 312 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 MARCH6O60337 910 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 DCTN3O75935 186 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 GNA14O95837 355 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 KLK7P49862 253 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 HPCAP84074 193 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 SLC34A1Q06495 639 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 EHHADHQ08426 723 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 GIT2Q14161 759 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 MBTPS1Q14703 1052 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 PLA2G4FQ68DD2 849 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 TRMT1LQ7Z2T5 733 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 C4orf19Q8IY42 314 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 TUBA8Q9NY65 449 aaPredicted RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 PTTG2Q9NZH5 202 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 LRRC53A6NM62 1247 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 PITPNM1O00562 1244 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 LYPLA2O95372 231 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 FGFR1OPO95684 399 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 FTCDO95954 541 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 LYNP07948 512 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 CKBP12277 381 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 ACADVLP49748 655 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 CLCN2P51788 898 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 POLGP54098 1239 aaPredicted RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 VWA3BQ502W6 1294 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 PRPF38BQ5VTL8 546 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 MARK2Q7KZI7 788 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 CATSPER3Q86XQ3 398 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 CCNJLQ8IV13 435 aa13.78□□□□□ -0.2
DDX56-206ENST00000446987 SCG3Q8WXD2 468 aaKnown RBP13.78□□□□□ -0.2
DDX56-206ENST00000446987 SCLYQ96I15 445 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms