RNA–Protein interactions for RNA: ENST00000446349.5

PTPN3-204, Transcript of protein tyrosine phosphatase, non-receptor type 3, humanhuman

TSL 1 (best) BASIC

Gene PTPN3, Length 8,630 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN3-204ENST00000446349 TMEM253P0C7T8 217 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 RSPH10BP0C881 870 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 MBL2P11226 248 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 GUCY2CP25092 1073 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CNTFP26441 200 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ANKS6Q68DC2 871 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ADGRF2Q8IZF7 708 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ZNF556Q9HAH1 456 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CYB561D2O14569 222 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ANGPT2O15123 496 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 FKTNO75072 461 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CDH16O75309 829 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM49P0CI25 452 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM49CP0CI26 452 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CKBP12277 381 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 SMARCB1Q12824 385 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 FAM83EQ2M2I3 478 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TAGAPQ8N103 731 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CCNYL1Q8N7R7 359 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 SCOCQ9UIL1 159 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PCDHB5Q9Y5E4 795 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TRPV2Q9Y5S1 764 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 LARGE1O95461 756 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 NCALDP61601 193 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 AP2B1P63010 937 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 NUGGCQ68CJ6 796 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PIP4K2CQ8TBX8 421 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 RSPH1Q8WYR4 309 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 AGBL1Q96MI9 1066 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 WDR41Q9HAD4 459 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 GID8Q9NWU2 228 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TRIM49BA6NDI0 452 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 SLC15A5A6NIM6 579 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 STX7O15400 261 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 APRTP07741 180 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PKP1Q13835 747 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ZPBP2Q6X784 338 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 BSNDQ8WZ55 320 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CGRRF1Q99675 332 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ROPN1BQ9BZX4 212 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ELOVL4Q9GZR5 314 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 RUBCNLQ9H714 662 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ROPN1Q9HAT0 212 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TUBGCP4Q9UGJ1 667 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 TBC1D12O60347 775 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 BYSLQ13895 437 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CENPPQ6IPU0 288 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 NFRKBQ6P4R8 1299 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 DDIASQ8IXT1 998 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 CYFIP2Q96F07 1278 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PRMT6Q96LA8 375 aaPredicted RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 UBE2OQ9C0C9 1292 aaKnown RBP8.91□□□□□ -0.98
PTPN3-204ENST00000446349 PLAAQ9Y263 795 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ATP11BQ9Y2G3 1177 aa8.91□□□□□ -0.98
PTPN3-204ENST00000446349 ITGB3P05106 788 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 MMEP08473 750 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 RRM1P23921 792 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 CXCL9Q07325 125 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 CASP8Q14790 479 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ZKSCAN8Q15776 578 aaPredicted RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 TMC7Q7Z402 723 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 SCUBE2Q9NQ36 999 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 SCHIP1Q9P0W5 487 aaPredicted RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 IFT88Q13099 833 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 AGAP9Q5VTM2 703 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ZBED8Q8IZ13 594 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 TAAR1Q96RJ0 339 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 POLLQ9UGP5 575 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 AFF4Q9UHB7 1163 aaKnown RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 VPS51Q9UID3 782 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 FAF1Q9UNN5 650 aaPredicted RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 SNX24Q9Y343 169 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 CDY2AQ9Y6F7 541 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 CDY1Q9Y6F8 540 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 MAGEB16A2A368 324 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ADCY6O43306 1168 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 KCTD16Q68DU8 428 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ACAD10Q6JQN1 1059 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 GPAT2Q6NUI2 795 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 RETSATQ6NUM9 610 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 MCEEQ96PE7 176 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ARMC7Q9H6L4 198 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 AGO4Q9HCK5 861 aaKnown RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 CHST12Q9NRB3 414 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 NRCAMQ92823 1304 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 SYF2O95926 243 aaKnown RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 PSEN1P49768 467 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ADCK2Q7Z695 626 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 ST13P4Q8IZP2 240 aaPredicted RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 SPATA18Q8TC71 538 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 HES6Q96HZ4 224 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 RAB6BQ9NRW1 208 aa8.9□□□□□ -0.98
PTPN3-204ENST00000446349 TRMT6Q9UJA5 497 aaKnown RBP8.9□□□□□ -0.98
PTPN3-204ENST00000446349 EVPLLA8MZ36 301 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 PTPN3P26045 913 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 CHADLQ6NUI6 762 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 SHC4Q6S5L8 630 aa8.9□□□□□ -0.99
PTPN3-204ENST00000446349 C1orf131Q8NDD1 294 aaKnown RBP8.9□□□□□ -0.99
PTPN3-204ENST00000446349 ABHD8Q96I13 439 aa8.9□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms