RNA–Protein interactions for RNA: ENST00000445569.6

CALD1-211, Transcript of caldesmon 1, humanhuman

TSL 5

Gene CALD1, Length 525 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-211ENST00000445569 SLC13A5Q86YT5 568 aaPredicted RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 GOLGA6L1Q8N7Z2 621 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 C12orf50Q8NA57 414 aaPredicted RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 C18orf8Q96DM3 657 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 PKNOX2Q96KN3 472 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 TNIP3Q96KP6 325 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 HEXIM2Q96MH2 286 aaKnown RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 MCEEQ96PE7 176 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 NCAPGQ9BPX3 1015 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 TRAIPQ9BWF2 469 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 AP1M1Q9BXS5 423 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 DDX47Q9H0S4 455 aaKnown RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 CYLDQ9NQC7 956 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 FAM114A2Q9NRY5 505 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 FAM105AQ9NUU6 356 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 DDX56Q9NY93 547 aaKnown RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 HMGXB4Q9UGU5 601 aa11.04□□□□□ -0.64
CALD1-211ENST00000445569 DMGDHQ9UI17 866 aaKnown RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 UTP11Q9Y3A2 253 aaKnown RBP11.04□□□□□ -0.64
CALD1-211ENST00000445569 SCN1AP35498 2009 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 TCRBV5S1A1TA0A578 114 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 FAM170AA1A519 330 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 ARHGEF37A1IGU5 675 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 KPNA7A9QM74 516 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 PIRO00625 290 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 AKAP5P24588 427 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GABRB2P47870 512 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 MARCKSL1P49006 195 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 CDH8P55286 799 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 RNASE9P60153 205 aaKnown RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 PSMC1P62191 440 aaKnown RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 SLC7A5Q01650 507 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 ITGA7Q13683 1181 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 CYP1B1Q16678 543 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GOLGA7BQ2TAP0 167 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 PTPN20Q4JDL3 420 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 FAM26DQ5JW98 314 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GLRA4Q5JXX5 417 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 PPP1R15BQ5SWA1 713 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 CCSAPQ6IQ19 270 aaPredicted RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 DPH6Q7L8W6 267 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 ZDHHC17Q8IUH5 632 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 TOP6BLQ8N6T0 577 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 SMG8Q8ND04 991 aaKnown RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 APPL2Q8NEU8 664 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 EXD1Q8NHP7 514 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 SPATA18Q8TC71 538 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GRK7Q8WTQ7 553 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 PPP1R13LQ8WUF5 828 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 C18orf25Q96B23 403 aaPredicted RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 PGBD4Q96DM1 585 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 BTBD6Q96KE9 485 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GLT1D1Q96MS3 346 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 ZMAT2Q96NC0 199 aaKnown RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 SNX25Q9H3E2 840 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 EPB41L5Q9HCM4 733 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 ERVK-5Q9HDB9 667 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 UBN1Q9NPG3 1134 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 MED4Q9NPJ6 270 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 FAM53CQ9NYF3 392 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 CHORDC1Q9UHD1 332 aaPredicted RBP11.03□□□□□ -0.64
CALD1-211ENST00000445569 ST3GAL5Q9UNP4 418 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 GIT1Q9Y2X7 761 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 HES2Q9Y543 173 aa11.03□□□□□ -0.64
CALD1-211ENST00000445569 SIGLEC16A6NMB1 481 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 PODXLO00592 558 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 FSCN2O14926 492 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 GAS8O95995 478 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 KRT1P04264 644 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 KRT7P08729 469 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 CTSHP09668 335 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 KRT3P12035 628 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 WARSP23381 471 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 PTPN7P35236 360 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 SCNN1AP37088 669 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 THPOP40225 353 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 SSR1P43307 286 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 ACLYP53396 1101 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 BCAT1P54687 386 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 SLC8A3P57103 927 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 NFX1Q12986 1120 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 TRIM32Q13049 653 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 HLTFQ14527 1009 aaKnown RBP eCLIP11.02□□□□□ -0.659e-6■□□□□ 9.4
CALD1-211ENST00000445569 HADHQ16836 314 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 ARHGAP17Q68EM7 881 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 SCARA3Q6AZY7 606 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 SYDE1Q6ZW31 735 aaPredicted RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 XYLT1Q86Y38 959 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 CCDC50Q8IVM0 306 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 MREGQ8N565 214 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 OR6B3Q8NGW1 331 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 STK32AQ8WU08 396 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 HDAC7Q8WUI4 952 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 LRRC45Q96CN5 670 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 MCRS1Q96EZ8 462 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 DDX27Q96GQ7 796 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 PPP1R10Q96QC0 940 aaKnown RBP11.02□□□□□ -0.65
CALD1-211ENST00000445569 TWNKQ96RR1 684 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 RUFY1Q96T51 708 aa11.02□□□□□ -0.65
CALD1-211ENST00000445569 TMEM106CQ9BVX2 250 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms