RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 LPIN3Q9BQK8 851 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 SYT15Q9BQS2 421 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 C11orf84Q9BUA3 381 aaPredicted RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ZCWPW1Q9H0M4 648 aa16.08■□□□□ 0.16
CCNE1-203ENST00000444983 ALG13Q9NP73 1137 aaKnown RBP16.08■□□□□ 0.16
CCNE1-203ENST00000444983 SSU72P8A0A1W2PR75 194 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 O00370 1275 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 PDE6CP51160 858 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 PSMC1P62191 440 aaKnown RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 CDR2Q01850 454 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 CCDC142Q17RM4 750 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 TSR1Q2NL82 804 aaKnown RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 CTXN3Q4LDR2 81 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 PAQR9Q6ZVX9 377 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 MYCBPAPQ8TBZ2 947 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 SLC20A1Q8WUM9 679 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 RIN2Q8WYP3 895 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 BAG1Q99933 345 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 CLSTN3Q9BQT9 956 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 ZNHIT6Q9NWK9 470 aaKnown RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 GTF3C4Q9UKN8 822 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 MTUS1Q9ULD2 1270 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 PCDHGC3Q9UN70 934 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 COLQQ9Y215 455 aaPredicted RBP16.07■□□□□ 0.16
CCNE1-203ENST00000444983 PTPRDP23468 1912 aa16.07■□□□□ 0.16
CCNE1-203ENST00000444983 OR6C75A6NL08 312 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 H7C4K7 107 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 CFHP08603 1231 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 BRD2P25440 801 aaKnown RBP16.06■□□□□ 0.16
CCNE1-203ENST00000444983 ERVFC1P60507 584 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 CCZ1BP86790 482 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 CCZ1P86791 482 aaPredicted RBP16.06■□□□□ 0.16
CCNE1-203ENST00000444983 FMO1Q01740 532 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 PTPN14Q15678 1187 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 CNGA2Q16280 664 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 PSMD5Q16401 504 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 SGO2Q562F6 1265 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 PPP1R26Q5T8A7 1209 aaPredicted RBP16.06■□□□□ 0.16
CCNE1-203ENST00000444983 PPP2R2DQ66LE6 453 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 TMTC1Q8IUR5 882 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 SLC30A5Q8TAD4 765 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 AGPAT1Q99943 283 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 KCNF1Q9H3M0 494 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 SLC28A3Q9HAS3 691 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 RXFP1Q9HBX9 757 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 TMLHEQ9NVH6 421 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 PUF60Q9UHX1 559 aaKnown RBP16.06■□□□□ 0.16
CCNE1-203ENST00000444983 WDR3Q9UNX4 943 aaKnown RBP eCLIP16.06■□□□□ 0.16
CCNE1-203ENST00000444983 TRIOBPQ9H2D6 2365 aa16.06■□□□□ 0.16
CCNE1-203ENST00000444983 FSCN2O14926 492 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 GRM6O15303 877 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 MMEP08473 750 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 PKDCCQ504Y2 493 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 KIAA1841Q6NSI8 718 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 LCLAT1Q6UWP7 414 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 CYP26C1Q6V0L0 522 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 FUKQ8N0W3 1084 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 FBXO22Q8NEZ5 403 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 POF1BQ8WVV4 589 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 CYFIP2Q96F07 1278 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 PCED1BQ96HM7 432 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 HNRNPABQ99729 332 aaKnown RBP16.05■□□□□ 0.16
CCNE1-203ENST00000444983 NHEJ1Q9H9Q4 299 aaPredicted RBP16.05■□□□□ 0.16
CCNE1-203ENST00000444983 FNIP2Q9P278 1114 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 ADAM12O43184 909 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 THAP12O43422 761 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 URODP06132 367 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 OR4Q2P0C623 313 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 CD19P15391 556 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 ANXA13P27216 316 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 EIF4A3P38919 411 aaKnown RBP16.05■□□□□ 0.16
CCNE1-203ENST00000444983 GPR17Q13304 367 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 BMS1Q14692 1282 aaKnown RBP16.05■□□□□ 0.16
CCNE1-203ENST00000444983 STILQ15468 1287 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 MDH1BQ5I0G3 518 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 PALB2Q86YC2 1186 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 CCDC112Q8NEF3 446 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 TIFAQ96CG3 184 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 PCDHB18PQ96TA0 734 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 B3GNT5Q9BYG0 378 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 DNAI2Q9GZS0 605 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 MRPL17Q9NRX2 175 aaKnown RBP16.05■□□□□ 0.16
CCNE1-203ENST00000444983 FAM49BQ9NUQ9 324 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 TSPAN16Q9UKR8 245 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 NENFQ9UMX5 172 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 SSX2IPQ9Y2D8 614 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 CDY1Q9Y6F8 540 aa16.05■□□□□ 0.16
CCNE1-203ENST00000444983 ATG2AQ2TAZ0 1938 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 A0A087X0T9 212 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 DDX3XO00571 662 aaKnown RBP eCLIP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 C2CD2LO14523 706 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 MED7O43513 233 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 ABLIM3O94929 683 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 LCA5LO95447 670 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 VNN2O95498 520 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 CYP1A1P04798 512 aaPredicted RBP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 FAM228BP0C875 321 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 CCDC130P13994 396 aa16.04■□□□□ 0.16
CCNE1-203ENST00000444983 RPL17P18621 184 aaKnown RBP16.04■□□□□ 0.16
CCNE1-203ENST00000444983 CDH5P33151 784 aaPredicted RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms