RNA–Protein interactions for RNA: ENST00000442708.5

USP39-205, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-205ENST00000442708 LUZP1Q86V48 1076 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
USP39-205ENST00000442708 UBR7Q8N806 425 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 CCDC150Q8NCX0 1101 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 VPS16Q9H269 839 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 ADAM7Q9H2U9 754 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 CYP3A43Q9HB55 503 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 GCNT4Q9P109 453 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 LIMA1Q9UHB6 759 aaKnown RBP17.11■□□□□ 0.33
USP39-205ENST00000442708 USP15Q9Y4E8 981 aaPredicted RBP17.11■□□□□ 0.33
USP39-205ENST00000442708 INSL5Q9Y5Q6 135 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 DENND4AQ7Z401 1863 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 TCF20Q9UGU0 1960 aaKnown RBP17.11■□□□□ 0.33
USP39-205ENST00000442708 VCANP13611 3396 aa17.11■□□□□ 0.33
USP39-205ENST00000442708 PRRG1O14668 218 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 CCL16O15467 120 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 ELF1P32519 619 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 SMAD4Q13485 552 aaKnown RBP17.1■□□□□ 0.33
USP39-205ENST00000442708 CUL2Q13617 745 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 MDH1BQ5I0G3 518 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 PPM1LQ5SGD2 360 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 LIN9Q5TKA1 542 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 GJB7Q6PEY0 223 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 TRIM65Q6PJ69 517 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 GPR149Q86SP6 731 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 ACOT1Q86TX2 421 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 CMASQ8NFW8 434 aaPredicted RBP17.1■□□□□ 0.33
USP39-205ENST00000442708 SUSD6Q92537 303 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 FAXDC2Q96IV6 333 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 NT5C1BQ96P26 610 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 PRKD2Q9BZL6 878 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 ELOVL4Q9GZR5 314 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 SIX2Q9NPC8 291 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 CISHQ9NSE2 258 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 ZDHHC7Q9NXF8 308 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 ABI2Q9NYB9 513 aaPredicted RBP17.1■□□□□ 0.33
USP39-205ENST00000442708 DPP7Q9UHL4 492 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 MAFFQ9ULX9 164 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 YIPF1Q9Y548 306 aa17.1■□□□□ 0.33
USP39-205ENST00000442708 GTPBP10A4D1E9 387 aaKnown RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 SPDYE4A6NLX3 237 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 SMTNL1A8MU46 457 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 CILPO75339 1184 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 CYP2F1P24903 491 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 PON1P27169 355 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 HOXA9P31269 272 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 COPB1P53618 953 aaKnown RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 MRPS5P82675 430 aaKnown RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 KCNMA1Q12791 1236 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 CETN1Q12798 172 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 UVSSAQ2YD98 709 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 PTCRAQ6ISU1 281 aaPredicted RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 LRSAM1Q6UWE0 723 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 GBP6Q6ZN66 633 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 CCDC149Q6ZUS6 474 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 RRAGAQ7L523 313 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 B3GALNT2Q8NCR0 500 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 ATXN2LQ8WWM7 1075 aaKnown RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 MYLPFQ96A32 169 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 KREMEN1Q96MU8 473 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 ASB2Q96Q27 587 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 B3GNT5Q9BYG0 378 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 AJAP1Q9UKB5 411 aaPredicted RBP17.09■□□□□ 0.33
USP39-205ENST00000442708 PCDHB5Q9Y5E4 795 aa17.09■□□□□ 0.33
USP39-205ENST00000442708 GREB1Q4ZG55 1949 aa17.08■□□□□ 0.33
USP39-205ENST00000442708 LRRC10BA6NIK2 292 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 CLDN5O00501 218 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 HNRNPA1P09651 372 aaKnown RBP eCLIP17.08■□□□□ 0.32
USP39-205ENST00000442708 HAPLN1P10915 354 aaPredicted RBP17.08■□□□□ 0.32
USP39-205ENST00000442708 BMP1P13497 986 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 IL9P15248 144 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 ACO1P21399 889 aaKnown RBP17.08■□□□□ 0.32
USP39-205ENST00000442708 GPR15P49685 360 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 NTHL1P78549 312 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 ITIH3Q06033 890 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 TWF1Q12792 350 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 EXOC3L4Q17RC7 722 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 ZNF394Q53GI3 561 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 PAQR9Q6ZVX9 377 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 UNC93AQ86WB7 457 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 CRYBG2Q8N1P7 616 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 PPM1KQ8N3J5 372 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 MYCBPAPQ8TBZ2 947 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 SPPL2BQ8TCT7 592 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 SMG7Q92540 1137 aaKnown RBP17.08■□□□□ 0.32
USP39-205ENST00000442708 PCED1BQ96HM7 432 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 TMEM30AQ9NV96 361 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 HCFC1R1Q9NWW0 138 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 CEP72Q9P209 647 aa17.08■□□□□ 0.32
USP39-205ENST00000442708 PES1O00541 588 aaKnown RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 NRG2O14511 850 aaPredicted RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 ATF6P18850 670 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 CDK11BP21127 795 aaKnown RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 KLK7P49862 253 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 CACNA2D1P54289 1103 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 RAD23BP54727 409 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 SMARCB1Q12824 385 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 NFE2Q16621 373 aaPredicted RBP17.07■□□□□ 0.32
USP39-205ENST00000442708 MGAT5BQ3V5L5 792 aa17.07■□□□□ 0.32
USP39-205ENST00000442708 ELMSAN1Q6PJG2 1045 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms