RNA–Protein interactions for RNA: ENST00000438763.6

HLA-DOB-206, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

APPRIS P1 BASIC

Gene HLA-DOB, Length 1,372 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-206ENST00000438763 TIGD5Q53EQ6 642 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 NAA35Q5VZE5 725 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 PHF13Q86YI8 300 aaPredicted RBP13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 RHOT2Q8IXI1 618 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 MCOLN2Q8IZK6 566 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 CPA5Q8WXQ8 436 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 RFFLQ8WZ73 363 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 ZNF592Q92610 1267 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 TRIM11Q96F44 468 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 WDR24Q96S15 920 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 MRPL9Q9BYD2 267 aaKnown RBP13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 THAP2Q9H0W7 228 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 NCANO14594 1321 aa13.13□□□□□ -0.31
HLA-DOB-206ENST00000438763 M0QZQ0 153 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 O00370 1275 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 BUB1O43683 1085 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 CYP11A1P05108 521 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 CYP1A2P05177 515 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 MYBL1P10243 752 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 ODC1P11926 461 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 CSF2RAP15509 400 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 LMO2P25791 158 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 NOP2P46087 812 aaKnown RBP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 HADHBP55084 474 aaKnown RBP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 NAP1L1P55209 391 aaKnown RBP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 WSCD1Q658N2 575 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 ARHGAP17Q68EM7 881 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 LCLAT1Q6UWP7 414 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 ACOT1Q86TX2 421 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 OSTM1Q86WC4 334 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 PASD1Q8IV76 773 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 WDTC1Q8N5D0 677 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 SLC35G2Q8TBE7 412 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 RABGGTAQ92696 567 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 ARHGEF26Q96DR7 871 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 TNIP3Q96KP6 325 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 SUSD3Q96L08 255 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 TMEM175Q9BSA9 504 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 NRDE2Q9H7Z3 1164 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 AVENQ9NQS1 362 aaPredicted RBP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 PRKAG2Q9UGJ0 569 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 GTF3C4Q9UKN8 822 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 DSEQ9UL01 958 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
HLA-DOB-206ENST00000438763 TTC3P53804 2025 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 B4GALT3O60512 393 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 MICAL2O94851 1124 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 ALDH2P05091 517 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 PDGFRBP09619 1106 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 MMP8P22894 467 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 SSTR3P32745 418 aaPredicted RBP13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 BRCC3P46736 316 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 OR1G1P47890 313 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 GATMP50440 423 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 SMAD3P84022 425 aaKnown RBP13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 LIN9Q5TKA1 542 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 DENND1BQ6P3S1 775 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 MON1BQ7L1V2 547 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 METTL23Q86XA0 190 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 C12orf29Q8N999 325 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 PPM1EQ8WY54 764 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 TOP1MTQ969P6 601 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 ALS2CR12Q96Q35 445 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 COLEC11Q9BWP8 271 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 IL23AQ9NPF7 189 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 ADAM22Q9P0K1 906 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 PCDHGC5Q9Y5F6 944 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 CAPN6Q9Y6Q1 641 aa13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 TDRD15B5MCY1 1934 aaKnown RBP13.11□□□□□ -0.31
HLA-DOB-206ENST00000438763 CTAGE9A4FU28 777 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 TBKBP1A7MCY6 615 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 NRP1O14786 923 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 FANCGO15287 622 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 TRAPPC3O43617 180 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 DGKIO75912 1065 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 MTA2O94776 668 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 BAIAP3O94812 1187 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 KIF4AO95239 1232 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 AMHP03971 560 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 TYMPP19971 482 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 GPD2P43304 727 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 PTP4A2Q12974 167 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 GRIN2CQ14957 1233 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 PPP1R26Q5T8A7 1209 aaPredicted RBP13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 ERICH1Q86X53 443 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 C1orf131Q8NDD1 294 aaKnown RBP13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 TPCN2Q8NHX9 752 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 BADQ92934 168 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 ZNF653Q96CK0 615 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 DPEP3Q9H4B8 488 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 DDX43Q9NXZ2 648 aaKnown RBP13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 UVRAGQ9P2Y5 699 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 DNAJB4Q9UDY4 337 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 CNOT8Q9UFF9 292 aaKnown RBP13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 TSPAN16Q9UKR8 245 aa13.1□□□□□ -0.31
HLA-DOB-206ENST00000438763 PCDHB8Q9UN66 801 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms