RNA–Protein interactions for RNA: ENST00000438552.6

SNRPB-202, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SNRPB, Length 1,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-202ENST00000438552 ZNF18P17022 549 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 MRPS5P82675 430 aaKnown RBP17.24■□□□□ 0.35
SNRPB-202ENST00000438552 INCA1Q0VD86 236 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 DUSP4Q13115 394 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 CUL2Q13617 745 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 IQCB1Q15051 598 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 MDH1BQ5I0G3 518 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 ARHGEF19Q8IW93 802 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 B3GALNT2Q8NCR0 500 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 MYLPFQ96A32 169 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 TWNKQ96RR1 684 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 RHOBTB2Q9BYZ6 727 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 CYP3A43Q9HB55 503 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 SLC27A5Q9Y2P5 690 aa17.24■□□□□ 0.35
SNRPB-202ENST00000438552 ATP1A3P13637 1013 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 IL9P15248 144 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 HOXA9P31269 272 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 APBA1Q02410 837 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 ITIH3Q06033 890 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 AAK1Q2M2I8 961 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 CES5AQ6NT32 575 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 GBP6Q6ZN66 633 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 ACOT1Q86TX2 421 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 PPM1KQ8N3J5 372 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 EHBP1Q8NDI1 1231 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 CMASQ8NFW8 434 aaPredicted RBP17.23■□□□□ 0.35
SNRPB-202ENST00000438552 SPPL2BQ8TCT7 592 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 ATXN2LQ8WWM7 1075 aaKnown RBP17.23■□□□□ 0.35
SNRPB-202ENST00000438552 SMG7Q92540 1137 aaKnown RBP17.23■□□□□ 0.35
SNRPB-202ENST00000438552 KAT5Q92993 513 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 SEPT5Q99719 369 aaPredicted RBP17.23■□□□□ 0.35
SNRPB-202ENST00000438552 PRKD2Q9BZL6 878 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 VPS16Q9H269 839 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 ADAM7Q9H2U9 754 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 CISHQ9NSE2 258 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 PCDHB5Q9Y5E4 795 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 PATJQ8NI35 1801 aa17.23■□□□□ 0.35
SNRPB-202ENST00000438552 MYH10P35580 1976 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 NOTCH4Q99466 2003 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 GTPBP10A4D1E9 387 aaKnown RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 SMTNL1A8MU46 457 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 BECN2A8MW95 431 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 CILPO75339 1184 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 LRG1P02750 347 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 HNRNPA1P09651 372 aaKnown RBP eCLIP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 PTPN1P18031 435 aaKnown RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 SLC9A1P19634 815 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 CYP27A1Q02318 531 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 TWF1Q12792 350 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 NFE2Q16621 373 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 EXOC3L4Q17RC7 722 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 UVSSAQ2YD98 709 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 MGAT5BQ3V5L5 792 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 FAM171BQ6P995 826 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 TRIM65Q6PJ69 517 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 GPR149Q86SP6 731 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 LUZP1Q86V48 1076 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 SPATA2LQ8IUW3 424 aaPredicted RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 C2orf15Q8WU43 125 aaKnown RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 SUSD6Q92537 303 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 FAXDC2Q96IV6 333 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 ASB2Q96Q27 587 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 LIMA1Q9UHB6 759 aaKnown RBP17.22■□□□□ 0.35
SNRPB-202ENST00000438552 MAFFQ9ULX9 164 aa17.22■□□□□ 0.35
SNRPB-202ENST00000438552 PAPLNO95428 1278 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 TBXAS1P24557 533 aaPredicted RBP17.21■□□□□ 0.35
SNRPB-202ENST00000438552 CYP2F1P24903 491 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 COPB1P53618 953 aaKnown RBP17.21■□□□□ 0.35
SNRPB-202ENST00000438552 SMARCB1Q12824 385 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 CBX2Q14781 532 aaPredicted RBP17.21■□□□□ 0.35
SNRPB-202ENST00000438552 MAPRE1Q15691 268 aaKnown RBP17.21■□□□□ 0.35
SNRPB-202ENST00000438552 ZNF394Q53GI3 561 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 GJB7Q6PEY0 223 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 LRSAM1Q6UWE0 723 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 RRAGAQ7L523 313 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 UNC93AQ86WB7 457 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 ANKRD20A12PQ8NF67 263 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 MYCBPAPQ8TBZ2 947 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 WHAMMQ8TF30 809 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 PCED1BQ96HM7 432 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 TNIP3Q96KP6 325 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 RIPOR3Q96MK2 946 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 ELOVL4Q9GZR5 314 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 POMKQ9H5K3 350 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 PIDD1Q9HB75 910 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 HCFC1R1Q9NWW0 138 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 GREB1Q4ZG55 1949 aa17.21■□□□□ 0.35
SNRPB-202ENST00000438552 OBSL1O75147 1896 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 CLDN5O00501 218 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 XYLBO75191 536 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 TPM2P07951 284 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 HAPLN1P10915 354 aaPredicted RBP17.2■□□□□ 0.34
SNRPB-202ENST00000438552 ATF6P18850 670 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 CDK11BP21127 795 aaKnown RBP17.2■□□□□ 0.34
SNRPB-202ENST00000438552 PON1P27169 355 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 MTHFRP42898 656 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 GPR15P49685 360 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 NTHL1P78549 312 aa17.2■□□□□ 0.34
SNRPB-202ENST00000438552 SMAD2Q15796 467 aaKnown RBP17.2■□□□□ 0.34
SNRPB-202ENST00000438552 PUS10Q3MIT2 529 aaKnown RBP17.2■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms