RNA–Protein interactions for RNA: ENST00000437600.8

CUX1-206, Transcript of cut like homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene CUX1, Length 3,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-206ENST00000437600 KIAA0319LQ8IZA0 1049 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 NLRP7Q8WX94 980 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CABS1Q96KC9 395 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 C16orf70Q9BSU1 422 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 IMPG2Q9BZV3 1241 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CYTH4Q9UIA0 394 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 LRRD1A4D1F6 860 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 GPR25O00155 361 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CD48P09326 243 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CLDN10P78369 228 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 LACTBP83111 547 aaPredicted RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 PTP4A2Q12974 167 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 LAMC2Q13753 1193 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 MPP2Q14168 576 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 P3H1Q32P28 736 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CCDC33Q8N5R6 958 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 EIF1ADQ8N9N8 165 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 OR6J1Q8NGC5 347 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 UBA3Q8TBC4 463 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 FEZF2Q8TBJ5 459 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 CD99L2Q8TCZ2 262 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP10.01□□□□□ -0.813e-7■■■■■ 94
CUX1-206ENST00000437600 TWNKQ96RR1 684 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 PAIP2Q9BPZ3 127 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 ELAC2Q9BQ52 826 aaKnown RBP10.01□□□□□ -0.81
CUX1-206ENST00000437600 KATNBL1Q9H079 304 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 IFT122Q9HBG6 1241 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 RNF186Q9NXI6 227 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 GJD2Q9UKL4 321 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 SBDSQ9Y3A5 250 aaKnown RBP eCLIP10.01□□□□□ -0.81
CUX1-206ENST00000437600 STYXL1Q9Y6J8 313 aa10.01□□□□□ -0.81
CUX1-206ENST00000437600 KIAA0100Q14667 2235 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 IGKV6-21A0A0C4DH24 114 aa10□□□□□ -0.81
CUX1-206ENST00000437600 MEFVO15553 781 aaPredicted RBP10□□□□□ -0.81
CUX1-206ENST00000437600 FAM189A1O60320 539 aa10□□□□□ -0.81
CUX1-206ENST00000437600 TMEM191BP0C7N4 346 aa10□□□□□ -0.81
CUX1-206ENST00000437600 RARGP13631 454 aa10□□□□□ -0.81
CUX1-206ENST00000437600 DRG2P55039 364 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 BEX3Q00994 111 aa10□□□□□ -0.81
CUX1-206ENST00000437600 LIN9Q5TKA1 542 aa10□□□□□ -0.81
CUX1-206ENST00000437600 DENND1BQ6P3S1 775 aa10□□□□□ -0.81
CUX1-206ENST00000437600 ZNF365Q70YC5 407 aa10□□□□□ -0.81
CUX1-206ENST00000437600 ARFGAP2Q8N6H7 521 aa10□□□□□ -0.81
CUX1-206ENST00000437600 JOSD2Q8TAC2 188 aa10□□□□□ -0.81
CUX1-206ENST00000437600 TCP11Q8WWU5 503 aa10□□□□□ -0.81
CUX1-206ENST00000437600 SEC16BQ96JE7 1060 aa10□□□□□ -0.81
CUX1-206ENST00000437600 CGRRF1Q99675 332 aa10□□□□□ -0.81
CUX1-206ENST00000437600 LPIN3Q9BQK8 851 aa10□□□□□ -0.81
CUX1-206ENST00000437600 DNM1LO00429 736 aa10□□□□□ -0.81
CUX1-206ENST00000437600 KIAA0754O94854 1291 aa10□□□□□ -0.81
CUX1-206ENST00000437600 ASS1P00966 412 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 MBTD1Q05BQ5 628 aa10□□□□□ -0.81
CUX1-206ENST00000437600 NFX1Q12986 1120 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 BYSLQ13895 437 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 CYP1B1Q16678 543 aa10□□□□□ -0.81
CUX1-206ENST00000437600 DUOXA2Q1HG44 320 aa10□□□□□ -0.81
CUX1-206ENST00000437600 OLFML2BQ68BL8 750 aa10□□□□□ -0.81
CUX1-206ENST00000437600 SUGP1Q8IWZ8 645 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 RHOT1Q8IXI2 618 aa10□□□□□ -0.81
CUX1-206ENST00000437600 LRRC34Q8IZ02 419 aa10□□□□□ -0.81
CUX1-206ENST00000437600 ATL2Q8NHH9 583 aa10□□□□□ -0.81
CUX1-206ENST00000437600 MORC4Q8TE76 937 aa10□□□□□ -0.81
CUX1-206ENST00000437600 VTI1AQ96AJ9 217 aa10□□□□□ -0.81
CUX1-206ENST00000437600 SGSM3Q96HU1 749 aa10□□□□□ -0.81
CUX1-206ENST00000437600 XPO6Q96QU8 1125 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 OSBPL7Q9BZF2 842 aa10□□□□□ -0.81
CUX1-206ENST00000437600 CXorf56Q9H5V9 222 aa10□□□□□ -0.81
CUX1-206ENST00000437600 TMEM134Q9H6X4 195 aa10□□□□□ -0.81
CUX1-206ENST00000437600 KIAA1586Q9HCI6 787 aa10□□□□□ -0.81
CUX1-206ENST00000437600 INTS9Q9NV88 658 aaKnown RBP10□□□□□ -0.81
CUX1-206ENST00000437600 ABLIM1O14639 778 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 LDHAP00338 332 aaKnown RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 NFICP08651 508 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ATF2P15336 505 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MNAT1P51948 309 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 EFNA5P52803 228 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 BPIFB4P59827 614 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ZNF200P98182 395 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 ZKSCAN8Q15776 578 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 ZNF699Q32M78 642 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ENOSF1Q7L5Y1 443 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ERICH1Q86X53 443 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 SRRM1Q8IYB3 904 aaKnown RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 C12orf29Q8N999 325 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 PPTC7Q8NI37 304 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 TRIB2Q92519 343 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ARHGEF2Q92974 986 aaKnown RBP9.99□□□□□ -0.81
CUX1-206ENST00000437600 TLCD1Q96CP7 247 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 HHIPL1Q96JK4 782 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 CDT1Q9H211 546 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 KIF9Q9HAQ2 790 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 HES2Q9Y543 173 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 SLC15A5A6NIM6 579 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 POC1B-GALNT4F8VUJ3 575 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 ACKR2O00590 384 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 OGTO15294 1046 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 PIGRP01833 764 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 KRT1P04264 644 aa9.99□□□□□ -0.81
CUX1-206ENST00000437600 MMP8P22894 467 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms