RNA–Protein interactions for RNA: ENST00000433807.5

MCF2L-215, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 4

Gene MCF2L, Length 557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-215ENST00000433807 PSMC1P62191 440 aaKnown RBP13.95□□□□□ -0.18
MCF2L-215ENST00000433807 YWHAEP62258 255 aaKnown RBP13.95□□□□□ -0.18
MCF2L-215ENST00000433807 MRPS5P82675 430 aaKnown RBP13.95□□□□□ -0.18
MCF2L-215ENST00000433807 TFF2Q03403 129 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 LRMPQ12912 555 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 DUSP4Q13115 394 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 CUL2Q13617 745 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 KRT31Q15323 416 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 EXOC3L4Q17RC7 722 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 TMC5Q6UXY8 1006 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 ATAD1Q8NBU5 361 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-215ENST00000433807 TNIP3Q96KP6 325 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 CRACR2AQ9BSW2 395 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 APOL5Q9BWW9 433 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 PRKD2Q9BZL6 878 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 DNAI2Q9GZS0 605 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 CRTAC1Q9NQ79 661 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 LIMA1Q9UHB6 759 aaKnown RBP13.95□□□□□ -0.18
MCF2L-215ENST00000433807 GTF3C4Q9UKN8 822 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 PCDHB5Q9Y5E4 795 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 INSL5Q9Y5Q6 135 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 GREB1Q4ZG55 1949 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 DENND4AQ7Z401 1863 aa13.95□□□□□ -0.18
MCF2L-215ENST00000433807 DOCK8Q8NF50 2099 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 CCDC195A0A1B0GUA6 201 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 LRRC10BA6NIK2 292 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 PES1O00541 588 aaKnown RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 MBTPS2O43462 519 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ATP2C2O75185 946 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 CILPO75339 1184 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 PTPN1P18031 435 aaKnown RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 TRIM21P19474 475 aaKnown RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 TUFMP49411 452 aaKnown RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 PLD1Q13393 1074 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ATAT1Q5SQI0 421 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 PTCRAQ6ISU1 281 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 TRIM65Q6PJ69 517 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 LRSAM1Q6UWE0 723 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 C4orf50Q6ZRC1 276 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 GPR149Q86SP6 731 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 B3GALNT2Q8NCR0 500 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 MYCBPAPQ8TBZ2 947 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 FAM200AQ8TCP9 573 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 SUSD6Q92537 303 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ZNF707Q96C28 371 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 FUBP3Q96I24 572 aaKnown RBP eCLIP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 FAM81BQ96LP2 452 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 NECTIN4Q96NY8 510 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ARID3AQ99856 593 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 DPEP3Q9H4B8 488 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 CBX8Q9HC52 389 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ABCB6Q9NP58 842 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 CISHQ9NSE2 258 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ABI2Q9NYB9 513 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 FAM50BQ9Y247 325 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 USP15Q9Y4E8 981 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 YIPF1Q9Y548 306 aa13.94□□□□□ -0.18
MCF2L-215ENST00000433807 ZNF638Q14966 1978 aaKnown RBP13.94□□□□□ -0.18
MCF2L-215ENST00000433807 GRXCR2A6NFK2 248 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 XYLBO75191 536 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 LRG1P02750 347 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 HAPLN1P10915 354 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-215ENST00000433807 CD58P19256 250 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 SLC9A1P19634 815 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 PON1P27169 355 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 MTHFRP42898 656 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 COPB1P53618 953 aaKnown RBP13.93□□□□□ -0.18
MCF2L-215ENST00000433807 TPM4P67936 248 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 GCNT1Q02742 428 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 TWF1Q12792 350 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 MGAT5BQ3V5L5 792 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 CFAP221Q4G0U5 840 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 MDH1BQ5I0G3 518 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 SPATA2LQ8IUW3 424 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-215ENST00000433807 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.93□□□□□ -0.18
MCF2L-215ENST00000433807 CRYBG2Q8N1P7 616 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 PPM1KQ8N3J5 372 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 SMG7Q92540 1137 aaKnown RBP13.93□□□□□ -0.18
MCF2L-215ENST00000433807 MYLPFQ96A32 169 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 RIPOR3Q96MK2 946 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 NT5C1AQ9BXI3 368 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 VPS16Q9H269 839 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 CRISPLD1Q9H336 500 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 TSPY26PQ9H489 355 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 HMGXB4Q9UGU5 601 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 SLC27A5Q9Y2P5 690 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 DENND4CQ5VZ89 1909 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 C5orf42Q9H799 3197 aa13.93□□□□□ -0.18
MCF2L-215ENST00000433807 CCL16O15467 120 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 ATP1A3P13637 1013 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 MAGEA11P43364 429 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 ALDH1A3P47895 512 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 ZNF445P59923 1031 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 CYP27A1Q02318 531 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 CBX2Q14781 532 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-215ENST00000433807 SMAD2Q15796 467 aaKnown RBP13.92□□□□□ -0.18
MCF2L-215ENST00000433807 CCDC142Q17RM4 750 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 FKBP15Q5T1M5 1219 aa13.92□□□□□ -0.18
MCF2L-215ENST00000433807 PHLDB3Q6NSJ2 640 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms