RNA–Protein interactions for RNA: ENST00000432340.1

NUP50-209, Transcript of nucleoporin 50, humanhuman

TSL 5

Gene NUP50, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-209ENST00000432340 LPIN3Q9BQK8 851 aa17.13■□□□□ 0.33
NUP50-209ENST00000432340 CLMPQ9H6B4 373 aa17.13■□□□□ 0.33
NUP50-209ENST00000432340 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
NUP50-209ENST00000432340 USP20Q9Y2K6 914 aa17.13■□□□□ 0.33
NUP50-209ENST00000432340 ARHGEF35A5YM69 484 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 TRABD2BA6NFA1 517 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 MYMKA6NI61 221 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 ARHGAP6O43182 974 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 LARGE1O95461 756 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 ODC1P11926 461 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 AARSP49588 968 aaKnown RBP eCLIP17.12■□□□□ 0.33
NUP50-209ENST00000432340 SEC13P55735 322 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 NLRP12P59046 1061 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 ZNF33AQ06730 810 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 SYCP2LQ5T4T6 812 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 BLOC1S2Q6QNY1 142 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 PADI6Q6TGC4 694 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 PIK3AP1Q6ZUJ8 805 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 BSNDQ8WZ55 320 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 CAMK1GQ96NX5 476 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 DCBLD2Q96PD2 775 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 TMEM206Q9H813 350 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 TUFT1Q9NNX1 390 aa17.12■□□□□ 0.33
NUP50-209ENST00000432340 TIMM13Q9Y5L4 95 aaPredicted RBP17.12■□□□□ 0.33
NUP50-209ENST00000432340 RRP8O43159 456 aaKnown RBP17.11■□□□□ 0.33
NUP50-209ENST00000432340 USP17L7P0C7H9 530 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 CYP3A5P20815 502 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 CALCRLQ16602 461 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 CEP120Q8N960 986 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 ENGASEQ8NFI3 743 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 PIP4K2CQ8TBX8 421 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 HMGB4Q8WW32 186 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 PNMA5Q96PV4 448 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 ACO2Q99798 780 aaKnown RBP17.11■□□□□ 0.33
NUP50-209ENST00000432340 PLEKHA5Q9HAU0 1116 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 ABCA7Q8IZY2 2146 aa17.11■□□□□ 0.33
NUP50-209ENST00000432340 LAMA5O15230 3695 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 SPTA1P02549 2419 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 TEX51A0A1B0GUA7 166 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 K7EQS6 105 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 ZNF217O75362 1048 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 SOAT2O75908 522 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 LRPAP1P30533 357 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 PDE6CP51160 858 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 CCT2P78371 535 aaKnown RBP17.1■□□□□ 0.33
NUP50-209ENST00000432340 NPY5RQ15761 445 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 PLEKHG6Q3KR16 790 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 NAIF1Q69YI7 327 aaPredicted RBP17.1■□□□□ 0.33
NUP50-209ENST00000432340 MPZL3Q6UWV2 235 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 TRMT11Q7Z4G4 463 aaKnown RBP17.1■□□□□ 0.33
NUP50-209ENST00000432340 LURAP1LQ8IV03 231 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 RASEFQ8IZ41 740 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 TXNDC5Q8NBS9 432 aaKnown RBP17.1■□□□□ 0.33
NUP50-209ENST00000432340 SPPL2BQ8TCT7 592 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 TSPAN18Q96SJ8 248 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 PTPRHQ9HD43 1115 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 FSCN3Q9NQT6 498 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 DSEQ9UL01 958 aa17.1■□□□□ 0.33
NUP50-209ENST00000432340 UBQLN1Q9UMX0 589 aaKnown RBP17.1■□□□□ 0.33
NUP50-209ENST00000432340 NUP205Q92621 2012 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 ZNF462Q96JM2 2506 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TRAV19A0A0A6YYK7 116 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 GJB3O75712 270 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 KLF8O95600 359 aaPredicted RBP17.09■□□□□ 0.33
NUP50-209ENST00000432340 EDN1P05305 212 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 CSH1P0DML2 217 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 CSH2P0DML3 217 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 ATF6P18850 670 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 PDIA3P30101 505 aaKnown RBP17.09■□□□□ 0.33
NUP50-209ENST00000432340 CFHR1Q03591 330 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 KCNC4Q03721 635 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 DMP1Q13316 513 aaPredicted RBP17.09■□□□□ 0.33
NUP50-209ENST00000432340 EML3Q32P44 896 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TXNDC8Q6A555 127 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TMEM92Q6UXU6 159 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 ALLCQ8N6M5 410 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TTC9BQ8N6N2 239 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 ERMNQ8TAM6 284 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 SETD7Q8WTS6 366 aaKnown RBP17.09■□□□□ 0.33
NUP50-209ENST00000432340 FOXJ1Q92949 421 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 KIFC3Q9BVG8 833 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 PRORYQ9H606 182 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TMEM134Q9H6X4 195 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 PCOLCE2Q9UKZ9 415 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 LAMA1P25391 3075 aa17.09■□□□□ 0.33
NUP50-209ENST00000432340 TCRBV21S2A2A0A5A6 115 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 CYSRT1A8MQ03 144 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 F11P03951 625 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 CKMP06732 381 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 ZNF883P0CG24 379 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 ZNF77Q15935 545 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 PREPLQ4J6C6 727 aaPredicted RBP17.08■□□□□ 0.32
NUP50-209ENST00000432340 SLC39A12Q504Y0 691 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 WDR45BQ5MNZ6 344 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 SLCO6A1Q86UG4 719 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 METTL23Q86XA0 190 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 EFCAB13Q8IY85 973 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 RGL4Q8IZJ4 473 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 THEM5Q8N1Q8 247 aa17.08■□□□□ 0.32
NUP50-209ENST00000432340 KIAA1958Q8N8K9 716 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms