RNA–Protein interactions for RNA: ENST00000430335.1

CSNK1E-207, Transcript of casein kinase 1 epsilon, humanhuman

TSL 5

Gene CSNK1E, Length 996 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-207ENST00000430335 ATAT1Q5SQI0 421 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 AOPEPQ8N6M6 819 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 NECTIN4Q96NY8 510 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 NT5C1BQ96P26 610 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 CRISPLD1Q9H336 500 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 ABCB6Q9NP58 842 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 CRTAC1Q9NQ79 661 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 GTF3C4Q9UKN8 822 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 PCDHB5Q9Y5E4 795 aa21.43■■□□□ 1.02
CSNK1E-207ENST00000430335 ATP2C2O75185 946 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 XYLBO75191 536 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 CAVIN2O95810 425 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 BMP1P13497 986 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 ZNF18P17022 549 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 PTPN1P18031 435 aaKnown RBP21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 TBXAS1P24557 533 aaPredicted RBP21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 TUFMP49411 452 aaKnown RBP21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 CUL2Q13617 745 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 CFAP221Q4G0U5 840 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 C4orf50Q6ZRC1 276 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 B3GALNT2Q8NCR0 500 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 MYCBPAPQ8TBZ2 947 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 SMG7Q92540 1137 aaKnown RBP21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 FUBP3Q96I24 572 aaKnown RBP eCLIP21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 TNIP3Q96KP6 325 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 NDST4Q9H3R1 872 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 YIPF1Q9Y548 306 aa21.42■■□□□ 1.02
CSNK1E-207ENST00000430335 CILPO75339 1184 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 LRG1P02750 347 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 NDST1P52848 882 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 PSMC1P62191 440 aaKnown RBP21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 PLD1Q13393 1074 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 CBX2Q14781 532 aaPredicted RBP21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 TJAP1Q5JTD0 557 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 GBP6Q6ZN66 633 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 DHX40Q8IX18 779 aaKnown RBP21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 CRYBG2Q8N1P7 616 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 FEZF2Q8TBJ5 459 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 INTS2Q9H0H0 1204 aaKnown RBP21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 HSD3B7Q9H2F3 369 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 DPEP3Q9H4B8 488 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 ABI2Q9NYB9 513 aaPredicted RBP21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 GCNT4Q9P109 453 aa21.41■■□□□ 1.02
CSNK1E-207ENST00000430335 CCL16O15467 120 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 HAPLN1P10915 354 aaPredicted RBP21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 IL9P15248 144 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 TWF1Q12792 350 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 LRMPQ12912 555 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 IQCB1Q15051 598 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 KRT31Q15323 416 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 SPATA2LQ8IUW3 424 aaPredicted RBP21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 TTC9BQ8N6N2 239 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 PIDD1Q9HB75 910 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 CISHQ9NSE2 258 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 LIMA1Q9UHB6 759 aaKnown RBP21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 CDH22Q9UJ99 828 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 SLC27A5Q9Y2P5 690 aa21.4■■□□□ 1.02
CSNK1E-207ENST00000430335 LRRC10BA6NIK2 292 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 CD58P19256 250 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 TRIM21P19474 475 aaKnown RBP21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 MAGEA11P43364 429 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 ALDH1A3P47895 512 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 YWHAEP62258 255 aaKnown RBP21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 GCNT1Q02742 428 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 EXOC3L4Q17RC7 722 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 CCDC142Q17RM4 750 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 MGAT5BQ3V5L5 792 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 MDH1BQ5I0G3 518 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 ANKRD20A12PQ8NF67 263 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 WHAMMQ8TF30 809 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 MYLPFQ96A32 169 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 PCED1BQ96HM7 432 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 ARID3AQ99856 593 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 NT5C1AQ9BXI3 368 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 DNAI2Q9GZS0 605 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 WDR6Q9NNW5 1121 aaKnown RBP21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 PRKAG3Q9UGI9 489 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 HMGXB4Q9UGU5 601 aa21.39■■□□□ 1.01
CSNK1E-207ENST00000430335 UNC80Q8N2C7 3258 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 TPM2P07951 284 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 TRIM65Q6PJ69 517 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 VSTM1Q6UX27 236 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 ACOT1Q86TX2 421 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 ELMOD1Q8N336 334 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 PPM1KQ8N3J5 372 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 UBR7Q8N806 425 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 TWNKQ96RR1 684 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 SEPT5Q99719 369 aaPredicted RBP21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 CRACR2AQ9BSW2 395 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 PHF7Q9BWX1 381 aaPredicted RBP21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 POMKQ9H5K3 350 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 TAB2Q9NYJ8 693 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 ASB3Q9Y575 518 aa21.38■■□□□ 1.01
CSNK1E-207ENST00000430335 BECN2A8MW95 431 aa21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 SLC9A1P19634 815 aa21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 CDK11BP21127 795 aaKnown RBP21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 CYP2F1P24903 491 aa21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 PON1P27169 355 aa21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 EPHB3P54753 998 aa21.37■■□□□ 1.01
CSNK1E-207ENST00000430335 PHLDB3Q6NSJ2 640 aa21.37■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms