RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 FAM162AQ96A26 154 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 TMA16Q96EY4 203 aaKnown RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 C9orf72Q96LT7 481 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CNPY3Q9BT09 278 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 KCNH7Q9NS40 1196 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 NAGPAQ9UK23 515 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 WDR47O94967 919 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 SERPIND1P05546 499 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CCND1P24385 295 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 MRPL28Q13084 256 aaKnown RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 AGAP9Q5VTM2 703 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 DPF2Q92785 391 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CINPQ9BW66 212 aaPredicted RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 YIPF3Q9GZM5 350 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 GOLGA8RI6L899 631 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 OGTO15294 1046 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 ICAM1P05362 532 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 MAPK1P28482 360 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 SLC26A2P50443 739 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 LONRF1Q17RB8 773 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 GLT1D1Q96MS3 346 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 SMARCAL1Q9NZC9 954 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 CRLS1Q9UJA2 301 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 TSR3Q9UJK0 312 aaKnown RBP13.32□□□□□ -0.28
LDB3-205ENST00000429277 TBX20Q9UMR3 447 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 PCDHB7Q9Y5E2 793 aa13.32□□□□□ -0.28
LDB3-205ENST00000429277 VWA5AO00534 786 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 GPR182O15218 404 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 STX7O15400 261 aaKnown RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 DEFA1P59665 94 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 DEFA3P59666 94 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 ANGEL2Q5VTE6 544 aaKnown RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 PLEKHM3Q6ZWE6 761 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 B4GALNT2Q8NHY0 566 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 APBB2Q92870 758 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 C2orf81A6NN90 581 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 RHOBTB1O94844 696 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 COILP38432 576 aaPredicted RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 FXR1P51114 621 aaKnown RBP eCLIP13.31□□□□□ -0.28
LDB3-205ENST00000429277 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CUL2Q13617 745 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 HORMAD1Q86X24 394 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 IPMKQ8NFU5 416 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 AGPAT5Q9NUQ2 364 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 GGA3Q9NZ52 723 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 DSEQ9UL01 958 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 SPACA6W5XKT8 324 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 TSPOAP1O95153 1857 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CLTCL1P53675 1640 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CCL15-CCL14A0A0B4J2E2 113 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 C17orf102A2RUQ5 167 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 PPP3CCP48454 512 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 NCALDP61601 193 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CCL15Q16663 113 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 BARGINQ6ZT62 677 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 COL23A1Q86Y22 540 aaPredicted RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 EMILIN2Q9BXX0 1053 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 MYOZ2Q9NPC6 264 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 KANSL1LA0AUZ9 987 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 SNTNA6NMZ2 147 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 GLRA3O75311 464 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 FBXO21O94952 628 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 NTSR2O95665 410 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 VDRP11473 427 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 NCAM1P13591 858 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CHRNA5P30532 468 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 OR1G1P47890 313 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 CARSP49589 748 aaKnown RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 ITGA8P53708 1063 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 POU4F1Q01851 419 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 KDELC2Q7Z4H8 507 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 LONP2Q86WA8 852 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 TC2NQ8N9U0 490 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 STN1Q9H668 368 aaKnown RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 KRCC1Q9NPI7 259 aaPredicted RBP13.31□□□□□ -0.28
LDB3-205ENST00000429277 ATP11BQ9Y2G3 1177 aa13.31□□□□□ -0.28
LDB3-205ENST00000429277 TIMM44O43615 452 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 LRG1P02750 347 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 HMBSP08397 361 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 HOXC6P09630 235 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 SLC9A1P19634 815 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 NAMPTP43490 491 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 FCGRTP55899 365 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 KLC1Q07866 573 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CSTF3Q12996 717 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 POLD3Q15054 466 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 C10orf120Q5SQS8 335 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 TRPM8Q7Z2W7 1104 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 NUP93Q8N1F7 819 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 MANSC1Q9H8J5 431 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 FAM49BQ9NUQ9 324 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 EIF3LQ9Y262 564 aaKnown RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.3□□□□□ -0.28
LDB3-205ENST00000429277 KCNQ2O43526 872 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 CNTFP26441 200 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ATICP31939 592 aa13.3□□□□□ -0.28
LDB3-205ENST00000429277 ZNF177Q13360 481 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms