RNA–Protein interactions for RNA: ENST00000428307.6

HDAC9-210, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,359 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-210ENST00000428307 ECEL1O95672 775 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 VDRP11473 427 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ATF7P17544 494 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-210ENST00000428307 PSMA2P25787 234 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 GPD2P43304 727 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 SREBF2Q12772 1141 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ZBTB6Q15916 424 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CNGA2Q16280 664 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ODF2Q5BJF6 829 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TMC3Q7Z5M5 1100 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ACOT1Q86TX2 421 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 KATNAL1Q9BW62 490 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 NT5C1AQ9BXI3 368 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CENPHQ9H3R5 247 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ZDHHC18Q9NUE0 388 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 FAM49BQ9NUQ9 324 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 GRHL1Q9NZI5 618 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TSPAN16Q9UKR8 245 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 Q9Y3F1 56 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 SMIM28A0A1B0GU29 152 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 SIGLEC16A6NMB1 481 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CYP3A5P20815 502 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 MAN1A1P33908 653 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 FNTAP49354 379 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 FLT3LGP49771 235 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CDR1P51861 262 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 INCA1Q0VD86 236 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 NFX1Q12986 1120 aaKnown RBP10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TRIM32Q13049 653 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 PDCLQ13371 301 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 PIGHQ14442 188 aaPredicted RBP10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 KCNT1Q5JUK3 1230 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CEP85LQ5SZL2 805 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ZDHHC24Q6UX98 284 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 MFSD7Q6UXD7 560 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 ALKAL1Q6UXT8 129 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 XYLT1Q86Y38 959 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 BEST2Q8NFU1 509 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 EXD1Q8NHP7 514 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TRIB2Q92519 343 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 EXOC4Q96A65 974 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 CCDC114Q96M63 670 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 LPIN3Q9BQK8 851 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA2P5Q9HBQ8 144 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 METTL5Q9NRN9 209 aaKnown RBP10.99□□□□□ -0.65
HDAC9-210ENST00000428307 TLL2Q9Y6L7 1015 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 HTTP42858 3142 aa10.99□□□□□ -0.65
HDAC9-210ENST00000428307 MGAMO43451 1857 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 CA12O43570 354 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 HCRTO43612 131 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 IGHA2P01877 340 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 HMGCRP04035 888 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 KRT1P04264 644 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 GNAT1P11488 350 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 VPS41P49754 854 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 RGS7P49802 495 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 CRYBB1P53674 252 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 DRG2P55039 364 aaKnown RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 KRT17Q04695 432 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 KLF1Q13351 362 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 SKIDA1Q1XH10 827 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 SMTNL2Q2TAL5 461 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 FAM47CQ5HY64 1035 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 TWF2Q6IBS0 349 aaKnown RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 SH2D3CQ8N5H7 860 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 C12orf50Q8NA57 414 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 OR6B3Q8NGW1 331 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 RAPGEF5Q92565 580 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 ZWILCHQ9H900 591 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 PASKQ96RG2 1323 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 LRRD1A4D1F6 860 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 PDGFRBP09619 1106 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 CTSHP09668 335 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 TAP1Q03518 808 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 PCBP1Q15365 356 aaKnown RBP eCLIP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 NBPF20Q3BBV1 942 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 UBXN11Q5T124 520 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 PPP1R26Q5T8A7 1209 aaPredicted RBP10.98□□□□□ -0.65
HDAC9-210ENST00000428307 C9orf57Q5W0N0 161 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 CYP4F22Q6NT55 531 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 RCOR2Q8IZ40 523 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 ARFGAP1Q8N6T3 406 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 ARRDC4Q8NCT1 418 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 FAM76AQ8TAV0 307 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 MAIP1Q8WWC4 291 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 DCLK3Q9C098 648 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 CNTN3Q9P232 1028 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 ASIC3Q9UHC3 531 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 PCSK1NQ9UHG2 260 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 DERAQ9Y315 318 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 NME7Q9Y5B8 376 aa10.98□□□□□ -0.65
HDAC9-210ENST00000428307 ANK1P16157 1881 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 GOLGA8KD6RF30 607 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 TULP2O00295 520 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 LRCH4O75427 683 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 GRAP2O75791 330 aa10.97□□□□□ -0.65
HDAC9-210ENST00000428307 STAU1O95793 577 aaKnown RBP10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms