RNA–Protein interactions for RNA: ENST00000428209.6

PRDM5-203, Transcript of PR/SET domain 5, humanhuman

TSL 1 (best) BASIC

Gene PRDM5, Length 2,338 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM5-203ENST00000428209 LEKR1Q6ZMV7 388 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 IFNL1Q8IU54 200 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 TTC39CQ8N584 583 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 NIPA2Q8N8Q9 360 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ART4Q93070 314 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ZMAT2Q96NC0 199 aaKnown RBP18.24■□□□□ 0.51
PRDM5-203ENST00000428209 WDR35Q9P2L0 1181 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ASIC3Q9UHC3 531 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 DERAQ9Y315 318 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 GAS8O95995 478 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 HMGCRP04035 888 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 PSMA2P25787 234 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ACTN2P35609 894 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ADAM17P78536 824 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 ZNF200P98182 395 aaPredicted RBP18.24■□□□□ 0.51
PRDM5-203ENST00000428209 CCNG2Q16589 344 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 RGMBQ6NW40 437 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 SYDE1Q6ZW31 735 aaPredicted RBP18.24■□□□□ 0.51
PRDM5-203ENST00000428209 SNX27Q96L92 541 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 SLITRK1Q96PX8 696 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 FAM118BQ9BPY3 351 aa18.24■□□□□ 0.51
PRDM5-203ENST00000428209 HMGB1P1B2RPK0 211 aaPredicted RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 HAS3O00219 553 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 ERBB2P04626 1255 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 KRT10P13645 584 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 ATF7P17544 494 aaPredicted RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 KAZNQ674X7 775 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 CHADLQ6NUI6 762 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 XYLT1Q86Y38 959 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 JOSD2Q8TAC2 188 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 UBA3Q8TBC4 463 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 NT5C1AQ9BXI3 368 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 FAM124BQ9H5Z6 455 aaPredicted RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 TNPO2O14787 897 aaKnown RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 GPD2P43304 727 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 IFFO1Q0D2I5 559 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 ZNF268Q14587 947 aaPredicted RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 TXNRD3NBQ6F5E7 133 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 MFSD7Q6UXD7 560 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 SAPCD2Q86UD0 394 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 APBA2Q99767 749 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 APOL6Q9BWW8 343 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 PABPC3Q9H361 631 aaKnown RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 NXF3Q9H4D5 531 aaKnown RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 METTL5Q9NRN9 209 aaKnown RBP18.23■□□□□ 0.51
PRDM5-203ENST00000428209 GJD2Q9UKL4 321 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 KIAA1257Q9ULG3 409 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 SNX9Q9Y5X1 595 aa18.23■□□□□ 0.51
PRDM5-203ENST00000428209 PDCLQ13371 301 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 PTK6Q13882 451 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 SNX17Q15036 470 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TRIP13Q15645 432 aaPredicted RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 GLRA4Q5JXX5 417 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 BEST2Q8NFU1 509 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TMEM40Q8WWA1 233 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ACSF2Q96CM8 615 aaPredicted RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 CAPS2Q9BXY5 557 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 FAM129AQ9BZQ8 928 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ZMYND15Q9H091 742 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ZFYVE28Q9HCC9 887 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 DDX56Q9NY93 547 aaKnown RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 WHRNQ9P202 907 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TUBGCP4Q9UGJ1 667 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 PIN4Q9Y237 131 aaKnown RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 Q9Y3F1 56 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TRPM7Q96QT4 1865 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TRIP12Q14669 1992 aaPredicted RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 PPEF2O14830 753 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 RECQL4O94761 1208 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 TJP3O95049 919 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ITIH2P19823 946 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 AKAP5P24588 427 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 AXLP30530 894 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 GSCP56915 257 aaPredicted RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ADCY2Q08462 1091 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 ZBTB6Q15916 424 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 SPOCD1Q6ZMY3 1216 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 EMC1Q8N766 993 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 SOCS4Q8WXH5 440 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 RAPGEF5Q92565 580 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 C18orf25Q96B23 403 aaPredicted RBP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 RNF19AQ9NV58 838 aa18.22■□□□□ 0.51
PRDM5-203ENST00000428209 BCCIPQ9P287 314 aaKnown RBP eCLIP18.22■□□□□ 0.51
PRDM5-203ENST00000428209 C17orf102A2RUQ5 167 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 GABRB2P47870 512 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 EIF3BP55884 814 aaKnown RBP18.21■□□□□ 0.51
PRDM5-203ENST00000428209 INHBEP58166 350 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 COPS2P61201 443 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 SLMAPQ14BN4 828 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 FSCN1Q16658 493 aaKnown RBP18.21■□□□□ 0.51
PRDM5-203ENST00000428209 C12orf29Q8N999 325 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 FNIP1Q8TF40 1166 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 SNF8Q96H20 258 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 KATNAL1Q9BW62 490 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 TSPAN16Q9UKR8 245 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 SCN1AP35498 2009 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 LRRD1A4D1F6 860 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 SHOX2O60902 331 aaPredicted RBP18.21■□□□□ 0.51
PRDM5-203ENST00000428209 NR1D1P20393 614 aa18.21■□□□□ 0.51
PRDM5-203ENST00000428209 ADCY8P40145 1251 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms